PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 31297.1 Da PI: 5.7953 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.4e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed +l+++++++G +W++ ++ g+ R++k+c++rw +yl XP_028075013.1 14 RGPWTPQEDHILINYINLYGHSNWRALPKQAGLLRCGKSCRLRWANYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.9 | 9.7e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_028075013.1 67 RGNFSEEEEETIIKLHEKLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MVRAPCCEKM GLKRGPWTPQ EDHILINYIN LYGHSNWRAL PKQAGLLRCG KSCRLRWANY 60 LKPDIKRGNF SEEEEETIIK LHEKLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKQKQ 120 PTQLEQEIKP PHSIKIQKND QVTEKEPEEA TMTYPNAVVR LQSPEHSASD ISSITTTSTD 180 NTTTTNTTSM DDDAFDNFPV VDENFWSDVF SVDNSGEMDD FPVAGADPDA QFQLSPRLHA 240 MEHICGGNNS SMHDGMDFWF NLFTKAGGLP ELPEF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKRLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 1e-78 | MYB family protein |