PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074711.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 347aa MW: 38066.6 Da PI: 8.6425

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell +++++ G g+W+t +++ g+ R++k+c++rw +yl XP_028074711.1 28 RGPWTPEEDELLSNYINKDGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 75 89****************************99**********97 PP
2	Myb_DNA-binding	46.4	9.4e-15	86	126	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_028074711.1 86 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 126 79*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MRQPSSSASS SGAGTSKTPC CSKVGLKRGP WTPEEDELLS NYINKDGEGR WRTLPKRAGL 60 LRCGKSCRLR WMNYLRPSVK RGLIAPDEED LILRLHRLLG NRWSLIAGRI PGRTDNEIKN 120 YWNTHLSKKL IGQGIDPRTH KPLSPNSSSN VDDKPSSSKA NQIQIPIPPK PNRNVVTPPP 180 PPPPPPALEQ PVSSSGRILI NKGRNRYYFE GPNANLGQYH GEEGLGNGGV VDYQNNSDVC 240 GIGLRSSNGL GGCNEDDDYD INYCSDDVFS SFLNSLIKED VFNSQHHQVQ QQFNGIAIAP 300 AAAAGSSDPL IYPPQSLAFG AGWDAPIMSA SNQIEPKRVH DHVEKQF

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MRQPSSSASS SGAGTSKTPC CSKVGLKRGP WTPEEDELLS NYINKDGEGR WRTLPKRAGL  60
LRCGKSCRLR WMNYLRPSVK RGLIAPDEED LILRLHRLLG NRWSLIAGRI PGRTDNEIKN  120
YWNTHLSKKL IGQGIDPRTH KPLSPNSSSN VDDKPSSSKA NQIQIPIPPK PNRNVVTPPP  180
PPPPPPALEQ PVSSSGRILI NKGRNRYYFE GPNANLGQYH GEEGLGNGGV VDYQNNSDVC  240
GIGLRSSNGL GGCNEDDDYD INYCSDDVFS SFLNSLIKED VFNSQHHQVQ QQFNGIAIAP  300
AAAAGSSDPL IYPPQSLAFG AGWDAPIMSA SNQIEPKRVH DHVEKQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-77	MYB family protein