PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074272.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 316aa    MW: 35471.6 Da    PI: 8.183
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.22e-31170226158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++kl  k+r+pylheSRh hA++R RgsgGrF
  XP_028074272.1 170 DGPIYVNAKQYHGILRRRQTRAKLEARNKL-VKARRPYLHESRHLHAVNRVRGSGGRF 226
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MSHFAVNHST WWNSHEDKQK FSLSLSKNLS LKVESLPHIC QEAKHLGIQE QDRDSSSTRS  60
TGPSHHEVTA MGGTNSQDQC ISSESVRDGG YEKHVEGQMT PIFFMGRHPD FVTNPSQVDF  120
SQSINHISYP YADPYYGGLF TTYGPQTTFQ PQTVGMAPAR VPLPLDLTED GPIYVNAKQY  180
HGILRRRQTR AKLEARNKLV KARRPYLHES RHLHAVNRVR GSGGRFLSTK KHQEPDLPHT  240
TGSQCIPDSV HSFQKGDISQ FEDECSITGV TDSDIIFRRP DRRFSAISPP QGVAVLGSEG  300
LMCNGTRHCD PFPFVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-48NF-YA family protein