PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028074271.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YA | ||||||||
Protein Properties | Length: 316aa MW: 35471.6 Da PI: 8.183 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 100.2 | 2e-31 | 170 | 226 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RRq+Rakle+++kl k+r+pylheSRh hA++R RgsgGrF XP_028074271.1 170 DGPIYVNAKQYHGILRRRQTRAKLEARNKL-VKARRPYLHESRHLHAVNRVRGSGGRF 226 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MSHFAVNHST WWNSHEDKQK FSLSLSKNLS LKVESLPHIC QEAKHLGIQE QDRDSSSTRS 60 TGPSHHEVTA MGGTNSQDQC ISSESVRDGG YEKHVEGQMT PIFFMGRHPD FVTNPSQVDF 120 SQSINHISYP YADPYYGGLF TTYGPQTTFQ PQTVGMAPAR VPLPLDLTED GPIYVNAKQY 180 HGILRRRQTR AKLEARNKLV KARRPYLHES RHLHAVNRVR GSGGRFLSTK KHQEPDLPHT 240 TGSQCIPDSV HSFQKGDISQ FEDECSITGV TDSDIIFRRP DRRFSAISPP QGVAVLGSEG 300 LMCNGTRHCD PFPFVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 3e-48 | NF-YA family protein |