PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074067.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 336aa    MW: 38321.7 Da    PI: 5.419
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.3e-083379246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     + WT eE +l+ +a +++G++    ++ +a++++  ++ k++k ++ +
   XP_028074067.1 33 KEWTFEENKLFENALAEFGPDspaFFEYVASRLP-SKSMKEIKRHYDS 79
                     57*****************99*************.**********966 PP
2Myb_DNA-binding461.2e-14141185347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +++G+g+W++I+r+   ++t+ q+ s+ qk+
   XP_028074067.1 141 PWTEEEHKLFLMGLNKYGKGDWRSISRYYVVTKTPTQVASHAQKF 185
                      8******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEWSDIYEPT ASDSYLLSSL TPQFEVDDQQ YSKEWTFEEN KLFENALAEF GPDSPAFFEY  60
VASRLPSKSM KEIKRHYDSL LEDVEMIEAG LLPIPNYVNT EGSEGDNNVE SSSKNDQEKG  120
SPSTKPARRT CPSHLRRKSV PWTEEEHKLF LMGLNKYGKG DWRSISRYYV VTKTPTQVAS  180
HAQKFYRRQT SNIPIDRRRP SIHDIRTVSS SFLPMPDRRN ELLQLPVPMP NLYDANYGMV  240
PEHNNNNFAT KTPVFPPGPN NNFNGCELPN FAAETLVFPP GPNNNFHGYE LNNFATETPN  300
FPPGPSASPM ANSMINQPTC AYPHPSYQFP YPMNYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-53MYB family protein