PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074048.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 333aa MW: 37358.9 Da PI: 8.4638

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.7	8.3e-20	38	130	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +W+++e+ aLi+a+ +++ +lrrg+l++++W+ev++ + +++ ++++qC++k+e+l+kry+ + +++ + + + ss++++f++++ XP_028074048.1 38 CWSHDETVALIDAYCDKWYSLRRGNLRANHWQEVAEDVanrcpvSAGNPPKTSVQCRHKMEKLRKRYRTEIQRSFSTpNHRFSSSWVHFKRMD 130 8****************************************999999*******************99998678899******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MAASSSSLSP PSPQDLLALP APPPPPSSTT SRRLPPPCWS HDETVALIDA YCDKWYSLRR 60 GNLRANHWQE VAEDVANRCP VSAGNPPKTS VQCRHKMEKL RKRYRTEIQR SFSTPNHRFS 120 SSWVHFKRMD CMEKGPSAVT VDASPIGVEA NEEGNEDEDE DEDDDDEDLY RSVKNRRGYG 180 NGIGSGSAFR IRIPGQSAPR TKMYSNNFDV KPHSNVDSNP NFVSTRVVRN GYSERLGLGN 240 SSGGGGGDGM GKKREGDPVA EIVTAINALR DGFVRMERVK MEMAREFEAM RMEMEMKRTE 300 MILESQQRIV ETFAKAFSEK RNKKPKRMPT PES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	7e-49	Trihelix family protein