PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028073853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 194aa MW: 22946.4 Da PI: 8.9828 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.8e-12 | 4 | 41 | 11 | 48 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 l++ v+++G + W+ Ia++m gR +kqc++rw+++l XP_028073853.1 4 ELIEMVEKYGVRKWSQIAEMMEGGRIGKQCRERWHNHL 41 599*********************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.8e-17 | 47 | 89 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W+++Ed++l++ +++ G++ W+ Ia++++ gRt++++k++w+ XP_028073853.1 47 KDTWSEDEDKILIQTHTEVGNK-WAEIAKRLP-GRTENSVKNHWN 89 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MCRELIEMVE KYGVRKWSQI AEMMEGGRIG KQCRERWHNH LRPDIKKDTW SEDEDKILIQ 60 THTEVGNKWA EIAKRLPGRT ENSVKNHWNA TKRRQYSKRK CRTKNPRPSS LLQNYIKSLN 120 LDGKFDINAK NALATEKFEE CSILLDQMPC PPVDDEKSFE MEEVPLDRVH VASFMKREVK 180 KEKDLMEMIT QVNL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 176 | 184 | KREVKKEKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-65 | MYB family protein |