PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073357.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 468aa MW: 51727.4 Da PI: 7.3073

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	6.8e-39	139	199	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk++s XP_028073357.1 139 PDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGSGRRKNKNAS 199 7899******************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MSEVKDHAIK LFGKTIPLLL NEQVSVVTTP LKTTKTHVDS DEHHDDNHQQ HHSTSHQNLL 60 SSASCSTQSQ NRVEDVQENN QKPSQIEVTE TRQEDPAATS CENPKTPSVE KEHSSSIVSK 120 NDEQSETSNN SQEKTLKKPD KILPCPRCNS MDTKFCYFNN YNVNQPRHFC KKCQRYWTAG 180 GTMRNVPVGS GRRKNKNASA SHYRHILAAQ ADVANGTVLN FGSDSPLCES MDSALTLAEK 240 SQKISVSCGG REYGDERSSR SSITGSDSAE RGGNSILQES VTTNFQNLNP QVPCFSGPPW 300 PCQWNSPQWR TPMPQPAFGP SGFPIAVYPA PPYWGCALPG SWNFPWISPD PATCSSPNSP 360 ILGKHSRDWD VLKPSSSEKE EALKENNLER CVWIPKTLRI DDPSQAAKSS IWSTLGIKNE 420 KKDSINTGGL FKAFQSKGDE KKHIDETSLV LQANPAALSR SLNFQESG

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MSEVKDHAIK LFGKTIPLLL NEQVSVVTTP LKTTKTHVDS DEHHDDNHQQ HHSTSHQNLL  60
SSASCSTQSQ NRVEDVQENN QKPSQIEVTE TRQEDPAATS CENPKTPSVE KEHSSSIVSK  120
NDEQSETSNN SQEKTLKKPD KILPCPRCNS MDTKFCYFNN YNVNQPRHFC KKCQRYWTAG  180
GTMRNVPVGS GRRKNKNASA SHYRHILAAQ ADVANGTVLN FGSDSPLCES MDSALTLAEK  240
SQKISVSCGG REYGDERSSR SSITGSDSAE RGGNSILQES VTTNFQNLNP QVPCFSGPPW  300
PCQWNSPQWR TPMPQPAFGP SGFPIAVYPA PPYWGCALPG SWNFPWISPD PATCSSPNSP  360
ILGKHSRDWD VLKPSSSEKE EALKENNLER CVWIPKTLRI DDPSQAAKSS IWSTLGIKNE  420
KKDSINTGGL FKAFQSKGDE KKHIDETSLV LQANPAALSR SLNFQESG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	7e-98	Dof family protein