PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028073240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 523aa MW: 57639.7 Da PI: 5.6611 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 46 | 1.1e-14 | 95 | 124 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 kA+Pk+il++m+v+ Lt+e+v+SHLQkYRl XP_028073240.1 95 KAVPKRILDMMNVEKLTRENVASHLQKYRL 124 8****************************8 PP | |||||||
2 | Response_reg | 45.8 | 3.4e-16 | 20 | 94 | 1 | 75 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpii 75 vl vdD+p+ +++l+++l+k +y +v++++++ al+ l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i XP_028073240.1 20 VLAVDDDPICLRVLETLLRKCQY-HVTTTSQAITALKVLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVI 94 799********************.***************888888******************987633.3356665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
MIVDQSFDEP NDRFPMGMRV LAVDDDPICL RVLETLLRKC QYHVTTTSQA ITALKVLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIKAVPKR ILDMMNVEKL TRENVASHLQ 120 KYRLYLKRIS CVASQQANIV AALGGADSAY LQMSSLNGFG NYHSMVGSAK FQNPTVGSFS 180 SSGMLDRLNT PAVLGSCGLS LTGMIQSKFQ PVILSGNQNG NTFQGMPTSL EFDQLQHNNG 240 VEHFGDLSTG TNDSMVFPIS GDFLDTNING SSSRNSLHGV PYNPVTLQGH PQPQEIERRG 300 VCGNQSRVSV EEFPSHLPDF ARCTDTWPAI QSSEIQSNSF TSSDFRINMS SIAMDGWSNS 360 HDISSVNSTN AQFPELRTDL KCLATPGLGS NGEQRMNYGM KSGWDHNKLD ASHNPNLMHS 420 PMNSLIPHGV MNSSSQRSDP MNAVGNRNND FRMIGQPNLV DHHLSMQRNG VEQSAMEATV 480 NIKQGYSYNN DDSLEDLVSA MMKQENIRDG DFGCETHSLG TCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 3e-41 | ARR-B family protein |