PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028073238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 653aa MW: 72464.2 Da PI: 5.9487 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.4 | 3.3e-28 | 201 | 254 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt +LH++Fv av+qL G+++A+Pk+il++m+v+ Lt+e+v+SHLQkYRl XP_028073238.1 201 KPRVVWTVDLHRKFVAAVNQL-GIDEAVPKRILDMMNVEKLTRENVASHLQKYRL 254 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.6 | 2.5e-12 | 203 | 253 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT +++ ++v av+qlG + +k+I +m+ +++t++++ s++qky+ XP_028073238.1 203 RVVWTVDLHRKFVAAVNQLGIDeaVPKRILDMMNvEKLTRENVASHLQKYR 253 678********************************99*************7 PP | |||||||
3 | Response_reg | 79.1 | 1.5e-26 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+++l+k +y +v++++++ al+ l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + G XP_028073238.1 20 VLAVDDDPICLRVLETLLRKCQY-HVTTTSQAITALKVLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGITHG 112 799********************.***************888888*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_028073238.1 113 ACDYLLKPIRIEELKN 128 *************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 653 aa Download sequence |
MIVDQSFDEP NDRFPMGMRV LAVDDDPICL RVLETLLRKC QYHVTTTSQA ITALKVLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP 120 IRIEELKNIW QHVVRRKKND PKDQNNFDKP HHESEGGQAI TVTGDSDQNS KLNRKRKEQN 180 EDEGDRADDG QNNEDPSMQK KPRVVWTVDL HRKFVAAVNQ LGIDEAVPKR ILDMMNVEKL 240 TRENVASHLQ KYRLYLKRIS CVASQQANIV AALGGADSAY LQMSSLNGFG NYHSMVGSAK 300 FQNPTVGSFS SSGMLDRLNT PAVLGSCGLS LTGMIQSKFQ PVILSGNQNG NTFQGMPTSL 360 EFDQLQHNNG VEHFGDLSTG TNDSMVFPIS GDFLDTNING SSSRNSLHGV PYNPVTLQGH 420 PQPQEIERRG VCGNQSRVSV EEFPSHLPDF ARCTDTWPAI QSSEIQSNSF TSSDFRINMS 480 SIAMDGWSNS HDISSVNSTN AQFPELRTDL KCLATPGLGS NGEQRMNYGM KSGWDHNKLD 540 ASHNPNLMHS PMNSLIPHGV MNSSSQRSDP MNAVGNRNND FRMIGQPNLV DHHLSMQRNG 600 VEQSAMEATV NIKQGYSYNN DDSLEDLVSA MMKQENIRDG DFGCETHSLG TCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-134 | ARR-B family protein |