PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028072265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 841aa MW: 92132 Da PI: 6.2112 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.5 | 4.7e-18 | 27 | 84 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le+++ ++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_028072265.1 27 YVRYTTEQVEALERVYIECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 84 5789****************************************************97 PP | |||||||
2 | START | 159.3 | 2.9e-50 | 165 | 371 | 2 | 203 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv+++ +++g++++ +f+ s+++sg a+ra+g+v +++ +e+l+d++ W +++++ e+ g g+++l XP_028072265.1 165 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 258 7899******************************************************.7777777777***********999999999****** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++++a+++l+p Rdf+++Ry+ l g++v++++S++ p+ +++vRae+lpSg+li+p+++g+s +++v+h++l++++++++lr+l+ XP_028072265.1 259 YTQTYAPTTLAPaRDFWSLRYTTNLDNGSLVVCERSLSGSGAGPNaaaAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLY 353 **************************************99999998999********************************************** PP HHHHHHHHHHHHHHTXXX CS START 186 ksglaegaktwvatlqrq 203 +s+ + ++k++ a l++ XP_028072265.1 354 ESSKVVAQKMTIAGLRYI 371 *************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 841 aa Download sequence |
MAMVMAQQQH RESSSGSISK HLDAGKYVRY TTEQVEALER VYIECPKPSS LRRQQLIREC 60 PILSNIEPKQ IKVWFQNRRC REKQRKEASR LQTVNRKLTA MNKLLMEEND RLQKQVSQLV 120 CENGYMRQQL QSASAATTDA SCESVVTTPQ HSLKDANNPA GLLSIAEETL AEFLSKATGT 180 AVDWVQMPGM KPGPDSVGIF AISHSCSGVA ARACGLVSLE PTKIAEILKD RPSWFRDCRS 240 LEVFTMFPAG NGGTIELVYT QTYAPTTLAP ARDFWSLRYT TNLDNGSLVV CERSLSGSGA 300 GPNAAAAAQF VRAEMLPSGY LIRPCEGGGS IIHIVDHMNL EAWSVPEVLR PLYESSKVVA 360 QKMTIAGLRY IRQIAQETSG EVVYGLGRQP AVLRTFSQRL NRGFNDAVNG FNDDGWSILN 420 CDGAEDVIVA INSTKNLVGT SSHSNSLALL GGILCAKASM LLQNVPPAVL VRFLREHRSE 480 WADFNVDAYS AAALKTNSFA YPGMRPTRFT GSQIIMPLGH TIEHEEMLEV IRLEGHSLAQ 540 EDAFVSRDIH LLQICSGVDE NAVGACSELV FAPIDEMFPD DAPLLPSGFR IIPLDSKSSD 600 TQDTLNAQRT LDLTSSLEVG PVTNHASGDG SNTRSVLTIA FQFPFENSLQ DNIAAMARQY 660 VRSVISSVQR VAMAISPSGL SPTMGPKLSP GSPEALTLAH WICQSYSYHL GSELLRSDSI 720 GGDSILKNLW HHPDAILCCS LKSLPVFVFA NQAGLDMLET TLVALQDITL DKIFDESGRK 780 VLYSDFAKIM QQGFACLPAG ICMSTMGRHI SYEQAIAWKV LAAEENTVHC LAFSFVNWSF 840 V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 0.0 | HD-ZIP family protein |