PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028071833.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 690aa MW: 78194.6 Da PI: 5.5127

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028071833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	45.8	1.2e-14	512	556	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +++i+ AA +L+v+ ++LKr CR yG +RWP Rk XP_028071833.1 512 EIPLDDILQNSKKSIQVAADNLKVSRSTLKRVCRSYGFPRWPPRK 556 6889999*************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MAEPGEEGRR AAYFPDDFKQ YVDTQLNRCP VVDDDYCNRF CGWVFWSRED DQSEHPPNIL 60 DLKKKTKDLL RKYVPGWLEC PVLFQFWAST MTMEGRSYLT TQNQPFALST SEEGIDDVKG 120 LCGYRMISKD YKFYMDIESS DEQLGVPGRV FNHGFLEFSP NVEYYSIKEY PLRDHALLCQ 180 IEQSWAIPVF DPSTHLCVGV LEMVSTASSK EFLWDYSIDF LDLHNYLEEV GLKSSISYVD 240 HHMDSNVNKR EALEEISEVL EVVCEVHGLD LAQVWAPCGV DCKCRALVKG DIFHLLLGHV 300 NCRELFGISD VEHHLRKGQG VIGRAFYSPN VLLCKDVTQL SIIDYPLAHY TRDAKLGGCF 360 AICLQSSCTR NDTYVLECFM PPSNKDYYGN QHTALRKILE TLKKSFRTFK LASGEELGGH 420 LYIEEIPFQN GEKLDSVQMS QTTNSLPRLE PLQSGGEMTQ MDLSNQQSMD ALNNESNVVS 480 AERSNIDVTC SQEKGKTQRP KRVHNKTGVK IEIPLDDILQ NSKKSIQVAA DNLKVSRSTL 540 KRVCRSYGFP RWPPRKKNMV GSSQPSESSP GVDHQQIPQL SFDLPFNQAS ATVVHANPHN 600 RAIEDANSVT MRAKYINDIT IKFRLSLSSG LVELQQQIAK RLHLEAGSYS VKYKDEEDDV 660 ILIACDDDLQ GCISTYRLLG TSIVVLIDPK

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MAEPGEEGRR AAYFPDDFKQ YVDTQLNRCP VVDDDYCNRF CGWVFWSRED DQSEHPPNIL  60
DLKKKTKDLL RKYVPGWLEC PVLFQFWAST MTMEGRSYLT TQNQPFALST SEEGIDDVKG  120
LCGYRMISKD YKFYMDIESS DEQLGVPGRV FNHGFLEFSP NVEYYSIKEY PLRDHALLCQ  180
IEQSWAIPVF DPSTHLCVGV LEMVSTASSK EFLWDYSIDF LDLHNYLEEV GLKSSISYVD  240
HHMDSNVNKR EALEEISEVL EVVCEVHGLD LAQVWAPCGV DCKCRALVKG DIFHLLLGHV  300
NCRELFGISD VEHHLRKGQG VIGRAFYSPN VLLCKDVTQL SIIDYPLAHY TRDAKLGGCF  360
AICLQSSCTR NDTYVLECFM PPSNKDYYGN QHTALRKILE TLKKSFRTFK LASGEELGGH  420
LYIEEIPFQN GEKLDSVQMS QTTNSLPRLE PLQSGGEMTQ MDLSNQQSMD ALNNESNVVS  480
AERSNIDVTC SQEKGKTQRP KRVHNKTGVK IEIPLDDILQ NSKKSIQVAA DNLKVSRSTL  540
KRVCRSYGFP RWPPRKKNMV GSSQPSESSP GVDHQQIPQL SFDLPFNQAS ATVVHANPHN  600
RAIEDANSVT MRAKYINDIT IKFRLSLSSG LVELQQQIAK RLHLEAGSYS VKYKDEEDDV  660
ILIACDDDLQ GCISTYRLLG TSIVVLIDPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-78	Nin-like family protein