PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028071622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 883aa MW: 100618 Da PI: 5.9091 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.3 | 8.7e-14 | 8 | 53 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_028071622.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 33 | 1.4e-10 | 60 | 103 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_028071622.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 883 aa Download sequence |
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD DNYEAGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIQTRQR KRKRKGIDYN AEIPFEKKPP PGFFDVTDED QTVEQPKFPT 240 TIEELEGEKR TDKEARLRKQ DIARNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPSP 300 QISDHELEEI AKMGYASDLL AGSDELTEGS GATRALLANY SQTPRQGMTP LRTPQRTPAG 360 KGDAIMMEAE NLARMRESQT PLLGGENPEL HPSDFSGVTP KKKEIQTPNP MLTPSATPGG 420 AAGMTPKLGM TPRLGMTPSR DGYSFSMTPK GTPVRDELHI NEEMEMHDSA KLELRRQADL 480 RRNLRSGLSN LPQPKNEYQV VIQPVPEDNE EPEEKIEEDM SDRIARERAE EEARLQALLK 540 KRSKVLQREL PRPPAASLEL IKDSLIRADE DKSSFVPPTL IEQADEMIRK ELVSLLDHDN 600 AKYPLKEKME KQKKKANGKS GFVPEIEDFE EDELKEADYL IEEECQFLRV TMGHENESLD 660 EFVEAHKTCL NDIMYFPTRN GYGLSSVAGN MEKLAALQNE FENVKKRMDD DTKKAQRLEQ 720 KIKLLTNGYQ MRAGKLWSQI EATFKQTDTA GTELECFQAL QKQEQLAASH RINGLWEEVQ 780 KQKVLEQTLQ KRYGDLTSEQ ERIQSLMDAY RLQEEVAAKN RALELANAAT NETVPISKTP 840 EPVVATDELG NSMMVDQSCD EIRSQEMDTD KMQTHATQKC SFI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 205 | KRRELKAAGIQTRQRKRKRK |
2 | 200 | 205 | RKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |