PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071622.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 883aa    MW: 100618 Da    PI: 5.9091
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.38.7e-14853248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g W   Ede+l+ av ++G+++W++I++ +  ++++kqck rw+ +l
   XP_028071622.1  8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53
                     78*****************************.************986 PP

2Myb_DNA-binding331.4e-1060103248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT eEde+l+++ k++++  W+tIa  +g  Rt+ qc +r+ k+l
   XP_028071622.1  60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103
                      68*****************99.********8..**********9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 883 aa     Download sequence    
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD DNYEAGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIQTRQR KRKRKGIDYN AEIPFEKKPP PGFFDVTDED QTVEQPKFPT  240
TIEELEGEKR TDKEARLRKQ DIARNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPSP  300
QISDHELEEI AKMGYASDLL AGSDELTEGS GATRALLANY SQTPRQGMTP LRTPQRTPAG  360
KGDAIMMEAE NLARMRESQT PLLGGENPEL HPSDFSGVTP KKKEIQTPNP MLTPSATPGG  420
AAGMTPKLGM TPRLGMTPSR DGYSFSMTPK GTPVRDELHI NEEMEMHDSA KLELRRQADL  480
RRNLRSGLSN LPQPKNEYQV VIQPVPEDNE EPEEKIEEDM SDRIARERAE EEARLQALLK  540
KRSKVLQREL PRPPAASLEL IKDSLIRADE DKSSFVPPTL IEQADEMIRK ELVSLLDHDN  600
AKYPLKEKME KQKKKANGKS GFVPEIEDFE EDELKEADYL IEEECQFLRV TMGHENESLD  660
EFVEAHKTCL NDIMYFPTRN GYGLSSVAGN MEKLAALQNE FENVKKRMDD DTKKAQRLEQ  720
KIKLLTNGYQ MRAGKLWSQI EATFKQTDTA GTELECFQAL QKQEQLAASH RINGLWEEVQ  780
KQKVLEQTLQ KRYGDLTSEQ ERIQSLMDAY RLQEEVAAKN RALELANAAT NETVPISKTP  840
EPVVATDELG NSMMVDQSCD EIRSQEMDTD KMQTHATQKC SFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186205KRRELKAAGIQTRQRKRKRK
2200205RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.10.0MYB family protein