PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028071168.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 346aa MW: 36780.1 Da PI: 10.5472

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028071168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	100.8	2.5e-31	81	168	6	97
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg..kaaksaaks 97 + +++hTkv+gR+RR+R++a+caar+F+L++eL +++d++ti WLl+ a+p+i+ +tgt++ +a ++ s +++ +++ +aa++++k+ XP_028071168.1 81 APPKDRHTKVEGRGRRIRIPATCAARIFQLTRELRHKSDGETIRWLLEHAEPSIISATGTGTVPAIAM------SVGGTLQIPttSAAATKKKR 168 5679********************************************************99999555......11222222221222222233 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MISLQKQEPV EDDQKQTSDH RINGGGDMDS APPLTSELPQ KLRQSPPPPA VTLKEEPPAE 60 FGMLPVAAMP LPLQIRPSAA APPKDRHTKV EGRGRRIRIP ATCAARIFQL TRELRHKSDG 120 ETIRWLLEHA EPSIISATGT GTVPAIAMSV GGTLQIPTTS AAATKKKRKL PQTPTAIVPP 180 LGGGATPPPP TQTLIPMWAI PSNSAPTFWI VPPTAAAAIA GPSNQPQIWT TPLINVSARP 240 ISPFVASMQQ STINITTSKT TPPLEIRALS SSVTTTSTVG AKTEKSVSIS APSTSSSGKS 300 GTTTIPTQML RDFSMEIYDK RELQFMGSSN STRSVSHHCH AESSKP

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MISLQKQEPV EDDQKQTSDH RINGGGDMDS APPLTSELPQ KLRQSPPPPA VTLKEEPPAE  60
FGMLPVAAMP LPLQIRPSAA APPKDRHTKV EGRGRRIRIP ATCAARIFQL TRELRHKSDG  120
ETIRWLLEHA EPSIISATGT GTVPAIAMSV GGTLQIPTTS AAATKKKRKL PQTPTAIVPP  180
LGGGATPPPP TQTLIPMWAI PSNSAPTFWI VPPTAAAAIA GPSNQPQIWT TPLINVSARP  240
ISPFVASMQQ STINITTSKT TPPLEIRALS SSVTTTSTVG AKTEKSVSIS APSTSSSGKS  300
GTTTIPTQML RDFSMEIYDK RELQFMGSSN STRSVSHHCH AESSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	170	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	7e-50	TCP family protein