PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 306aa MW: 33715.7 Da PI: 8.2579 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61 | 2.5e-19 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEde l ++v+++G ++W++I+r ++ gR++k+c++rw + XP_028070970.1 19 KGPWSTEEDESLQKLVQRHGARNWSLISRFIP-GRSGKSCRLRWCNQ 64 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 73 | 115 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+l+++a++++G++ W+tI+r ++ gRt++ +k++w++ XP_028070970.1 73 AFSPEEDDLILRAHARFGNK-WATISRLLN-GRTDNAVKNHWNST 115 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MENRSWVMEA TQKDVDRIKG PWSTEEDESL QKLVQRHGAR NWSLISRFIP GRSGKSCRLR 60 WCNQLSPEVE HRAFSPEEDD LILRAHARFG NKWATISRLL NGRTDNAVKN HWNSTLKRKF 120 PAAMLEGDAG GGGDERGGGQ VIRRLESGDV TVGINSESPS ASASDASDSS VQVISQMNVN 180 SNLFRPIARP VESTPISEMV IPPPPTALTL SLFGDSHPYE IHDKNYSPSP SAVTQPSHSR 240 SQSTESGPST AAAVEKPMFS TEFLNVMQEM IKKEVRSYLS RGLDQSGMEG SVRNAGVKRI 300 GISRID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 4e-70 | MYB family protein |