PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 254aa MW: 28741.2 Da PI: 6.9712 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 84 | 1.9e-26 | 74 | 155 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rre++ ++++k++k+lW+++s+kmre+gf rs+++C++kw+nl k++kk k+++++ +s +++y+++le XP_028070874.1 74 WVQEETRSLISFRREVDGLFNTSKSNKHLWDQISAKMREKGFDRSATMCTDKWRNLLKEFKKAKHQDRSS---ASAKMSYYKELE 155 ********************************************************************85...56689*****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MYLSEKPLPI DFYKGGGGGG ERDMVIEVSS NGELPPHHHH LQQQQQQQQQ MILGDSSGGE 60 DHEVKAPKKR AETWVQEETR SLISFRREVD GLFNTSKSNK HLWDQISAKM REKGFDRSAT 120 MCTDKWRNLL KEFKKAKHQD RSSASAKMSY YKELEELLRG RSKNGPYKSP SSSKVDLYIQ 180 FSDKGLEDGN IPFGPVEAGG QSTVNLERPL DHDGDPLAIT AADAVAASGV PPWNWRETPV 240 NGVYLILFFF FFFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13450.3 | 1e-104 | Trihelix family protein |