PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 32392.5 Da PI: 7.6616 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.9 | 1.7e-16 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd ll++++ +G g+W++ +++ g++Rt+k+c++rw++yl XP_028070638.1 22 KGPWTLEEDTLLIHYISCHGEGRWNLLSKRSGLKRTGKSCRLRWLNYL 69 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+ E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_028070638.1 75 RGNLTPHEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MSSSLTKSAS TSSTDEDTEL RKGPWTLEED TLLIHYISCH GEGRWNLLSK RSGLKRTGKS 60 CRLRWLNYLK PDIKRGNLTP HEQLLILDLH SKWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 QKQARHLKID SNSAAFQEII QCFWMPRLLR KIQGSPSSVM LSQNSATTQT LINHSSLLPQ 180 VSPNKGHVHT SEKTKSPSID YLESMSDSHI PQILEYPTSD YNTVAKGCYN VDNIGYDMEA 240 FSLASMVAPG DFEDSMGGSQ VAENNWVGSA ALADSLWNIV DESWVVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 3e-77 | MYB family protein |