PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070579.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 309aa    MW: 34053 Da    PI: 10.2652
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.5e-19161194134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++C ++kTp+WR+gp g+ktLCnaCG++yr+ +
  XP_028070579.1 161 CAHCDVSKTPQWREGPMGPKTLCNACGVRYRSGR 194
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MWLKGLSKSE HSSELKLLPN LAETASGASI PLQNDHSDRL EPGMFQVPSP VSVLESSSSC  60
SVEKNVSFSF KPYIPARTRT KRSRSSTINP WVVMTPPISS TSKRSHHLLA QSNDFPESNL  120
PNMNSNPVKR KLKKKKKLSQ LSRANEIDGT SLQRPIATKR CAHCDVSKTP QWREGPMGPK  180
TLCNACGVRY RSGRLFPQYR PALSPTFVPS LHSNSHKKVV EMRNKAIQEA AKAEAEPPMS  240
PAHKPNKKAA ITETEPPLSP FKATQEATIA ETEPPLSPPP EFVPMSSYLF DFDCILGVEG  300
NAPRMGGFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17782RTRTKR
2132138LKKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-37GATA family protein