PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028069886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37326.1 Da PI: 6.833 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.2 | 2.2e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv++++++G g+W++ ++ g++R++k+c++rw +yl XP_028069886.1 14 KGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_028069886.1 67 RGKFSQEEEQTILNLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 333 aa Download sequence |
MGRSPCCDER GLKKGPWTPE EDHKLVKYIH KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILN LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DIFSSLPHLI ALANLKELVE HHSWEEQAVR LQTEAVQMAS LQYLQYLLQP 180 QPSMSTFSNN SNSTVTDMET YNLLNSLSLM KDSSIQFGTP TPSSLGTTTT LQSIEDSFPF 240 SHMPDLQVPS SFQAPMDNKD IVQASDYTVL SHGEHSPTSP WLASTTSPSP PMAAAPTSIA 300 NMGDACSTSS YEGGHSSFWP EVLLEDPLFH EIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-102 | MYB family protein |