PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069709.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 319aa    MW: 36374 Da    PI: 6.2424
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.8e-172067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd ll+++++ +G g+W++ a+  g++R +k+c++rw++yl
   XP_028069709.1 20 RGPWTPEEDNLLIHYITCHGEGRWNLLAKSAGLKRNGKSCRLRWLNYL 67
                     89********************************************97 PP
2Myb_DNA-binding48.71.7e-1573116146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia+++  gRt++++k++w++
   XP_028069709.1  73 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLH-GRTDNEIKNYWRT 116
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MSTVSDRVSN GSQEEFELRR GPWTPEEDNL LIHYITCHGE GRWNLLAKSA GLKRNGKSCR  60
LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ HLHGRTDNEI KNYWRTRVQK  120
QARQLKIECN SKGFLEAIRC VWMPRLLEQM KQTPSPSSSS SHSTPLSTME AQNFTITSLH  180
PNLQAPLTLS CLQPSKLESL NQPIEESSSM TKSIIGFPDS MRTSQLPDIL EHPTSPAHEA  240
FGNSDNSSLV NDCYYVDIGN YEVEDFNLLS PMSVEGPRDL LFSDGQMAGS NWIGDDMAGT  300
LWNNMDELWQ FRKPEELGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-81MYB family protein