PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069308.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 479aa MW: 52033.1 Da PI: 6.5647

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069308.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	101	161	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k ++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ s XP_028069308.1 101 PDKVISCPRCNSFDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHFS 161 78999*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MNGGDSSDTK DPAIKLFGKT IPLPECHFPG KSGEKSDVGC QIPDKSQVME LCSGISKTEA 60 EDVHFNESGK QGKSSGSKDG QEEDNPAETS GVDQDKAFKK PDKVISCPRC NSFDTKFCYF 120 NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGRRKNKHF SSQYRQIVVS PDSVPATRIE 180 IPDSVNQQLF SCGESQSTLN PLTSSGTVLK FGPEGHLCES MTTVLHLKDQ KSCASDFGSS 240 RDKREDPPSC GSSITASSIQ ENQIPEKVNE LSQPNPLQCY PVPPWVSPWN QAWSDGASMV 300 ASRCSSELVS APVDGNPNPI QWCSTPMLAV PGFCPPSIPL QFVPASYWGC LPVWTTGTRH 360 IPMVGVDGGQ SPSLSTSNNL PTLGKHSRDA NLMDEESDKC VLVPKTLRID HSDEASKSSI 420 WGTLGFKSNK KETEESRCGI FKPFKPSGGE CKGHPSDTTQ VLEANPAALS RSHTFQEST

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MNGGDSSDTK DPAIKLFGKT IPLPECHFPG KSGEKSDVGC QIPDKSQVME LCSGISKTEA  60
EDVHFNESGK QGKSSGSKDG QEEDNPAETS GVDQDKAFKK PDKVISCPRC NSFDTKFCYF  120
NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGRRKNKHF SSQYRQIVVS PDSVPATRIE  180
IPDSVNQQLF SCGESQSTLN PLTSSGTVLK FGPEGHLCES MTTVLHLKDQ KSCASDFGSS  240
RDKREDPPSC GSSITASSIQ ENQIPEKVNE LSQPNPLQCY PVPPWVSPWN QAWSDGASMV  300
ASRCSSELVS APVDGNPNPI QWCSTPMLAV PGFCPPSIPL QFVPASYWGC LPVWTTGTRH  360
IPMVGVDGGQ SPSLSTSNNL PTLGKHSRDA NLMDEESDKC VLVPKTLRID HSDEASKSSI  420
WGTLGFKSNK KETEESRCGI FKPFKPSGGE CKGHPSDTTQ VLEANPAALS RSHTFQEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-66	Dof family protein