PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068857.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 402aa MW: 44061.2 Da PI: 6.5482

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.7	2.2e-34	34	163	2	110
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasec.eaesssssasnsssg... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el ++ ++s+a+++ + + ++++++++ XP_028068857.1 34 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDELEKLpawnPTSNANNFdQ----KLQEQEHEQElts 124 79**************************************************************77663333333422....2222211112234 PP TCP 89 ...................kaaksaakskksqksaasalnl 110 + ++++ + ++++++s+l + XP_028068857.1 125 ihhgggtvvdalggscsriD--QQQHMQMGNNNNNSSFLPP 163 55667788888877776331..2333333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MGETHHQATP SRLGLRHAGG EIVEVQGGHI VRSTGRKDRH SKVCTAKGPR DRRVRLSAHT 60 AIQFYDVQDR LGYDRPSKAV DWLIKNAKAA IDELEKLPAW NPTSNANNFD QKLQEQEHEQ 120 ELTSIHHGGG TVVDALGGSC SRIDQQQHMQ MGNNNNNSSF LPPSLDSDSI ADTIKSFFPM 180 GAAAVAEANS SAMQFQSFPP PDLLSRTSSQ SQDLRLSLQS FQDPILLHQQ QQQHHQQSQH 240 QTEQEQAIFS GTTSLGFDAN SGGWSEHQPQ EISRFQRMFA WNAGGDTTGT GGGGGFIFNS 300 PPTPQLLQPL FSQNQFLSQR GPLQSSNTQS VRAWIDPSSI SAADHHHRYQ SLPIHPSSFP 360 GIGFTSVGGF SGFRIPARIQ GEDEEHDGIS DKPSSASSDS YH

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MGETHHQATP SRLGLRHAGG EIVEVQGGHI VRSTGRKDRH SKVCTAKGPR DRRVRLSAHT  60
AIQFYDVQDR LGYDRPSKAV DWLIKNAKAA IDELEKLPAW NPTSNANNFD QKLQEQEHEQ  120
ELTSIHHGGG TVVDALGGSC SRIDQQQHMQ MGNNNNNSSF LPPSLDSDSI ADTIKSFFPM  180
GAAAVAEANS SAMQFQSFPP PDLLSRTSSQ SQDLRLSLQS FQDPILLHQQ QQQHHQQSQH  240
QTEQEQAIFS GTTSLGFDAN SGGWSEHQPQ EISRFQRMFA WNAGGDTTGT GGGGGFIFNS  300
PPTPQLLQPL FSQNQFLSQR GPLQSSNTQS VRAWIDPSSI SAADHHHRYQ SLPIHPSSFP  360
GIGFTSVGGF SGFRIPARIQ GEDEEHDGIS DKPSSASSDS YH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	9e-80	TCP family protein