PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068695.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 299aa MW: 32317.6 Da PI: 10.0991

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115	9.6e-36	96	184	4	85
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasns 85 + +++++hTkv+gR+RR+R++ +caar+F+L++eLG+++d++ti WLl+ a+p+i+++tgt++++a ++ +++++++++s+s XP_028068695.1 96 RAASTKDRHTKVEGRGRRIRMPPTCAARIFQLTRELGHKTDGETIRWLLEHAEPSIIAATGTGTIPAVSTfsatastTTKKKRNADSTS 184 6789**********************************************************999993333221222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MYGTSYLISH ALSLSPDLIR LRLNMSSVQK QLLDEDDDKR TLDLIINSQS HTNHHHQPPH 60 AAAVSLKQEP YAEGRPQPPH TMSPAATPMP VSIPKRAAST KDRHTKVEGR GRRIRMPPTC 120 AARIFQLTRE LGHKTDGETI RWLLEHAEPS IIAATGTGTI PAVSTFSATA STTTKKKRNA 180 DSTSSSGLAP LGGGATPPPT FVPMWAIPSN AAPTFWIVPP TASTIQQQPQ IWSAFPITAT 240 PFINISAAAA RPISHPPLEL SSVATSSTVG AKSENRESTT MASTLRDFSV EIYDKQQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-40	TCP family protein