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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 520aa MW: 56067.4 Da PI: 6.9169 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48 | 3e-15 | 150 | 209 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028068479.1 150 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 209 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.2 | 5.4e-15 | 252 | 303 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_028068479.1 252 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 303 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 520 aa Download sequence |
MDSSQNWLAF SLSNHHIPSH DSSHLSLFEA FNTTSNNPSG VVDRAEEDVR GGATELSILT 60 GGSGGGGGPK LEDFLGGGAT RTTDLCQFTG EAPTSVCETE IYDSELKTIA ASFLRGFSTD 120 PTDAQKQLAV APPPEPAAKK AVDTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQSR 180 KGRQVYLGGY DKEEKAARAY DLAALKYWGP TTTTNFPVSN YEKEIEEMKN MTRQEFVASL 240 RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 300 FRGLNAVTNF DMSRYDVKSI ANSNLPIGGI SGKSKTSSDS PSDNNKSLDG GVGTRRSDDR 360 DISSSSSLSF SSQPPSSISF ALPIKQVDNT VDYWSILGYT KSPSASSTNL FQGSNNGTST 420 FQGITPFSMD FPTNSTTTNV VHNNNGFFFN GGGGGGYFEQ QSASMSGSSG IPLGTPIALS 480 SNDSYEGGSG FGNWVGPSLH SFQSAKPNLS VFQTPIFGME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-132 | AP2 family protein |