PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067985.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 365aa MW: 41150.8 Da PI: 4.3527

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.3	3.5e-13	17	63	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+W++ Ed++l+ +++ G +W++ + g+ R++k+c++rw +yl XP_028067985.1 17 GPWSPAEDLRLISFIHKNGYSNWRSLPIQAGLSRCGKSCRLRWINYL 63 89*******************************************97 PP
2	Myb_DNA-binding	54.5	2.6e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_028067985.1 69 RGNFTNEEEETIIKLHQTLGNK-WSKIASYLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGRGRAPCCD KSKVKTGPWS PAEDLRLISF IHKNGYSNWR SLPIQAGLSR CGKSCRLRWI 60 NYLRPDVKRG NFTNEEEETI IKLHQTLGNK WSKIASYLPG RTDNEIKNVW NTHLKKRLAK 120 KDEKNHKNQT NDFSRTSSFS TSSTSSFMSS YGNNEGTEEL VLDEGQEGLA NKSYEPKEDI 180 PTTDHDHELK ESSSSSNSSI SCDASDYSNS SARVDVSMPE PEPEPEPEQE EEEEGSLFNL 240 GGPCEADNAT IAYDQVNNNS DDHQVIEIPL EDSDIDFWDM LDNLADPFQS IDESPQLPQE 300 LVASQSSNYD HHTEIEYCRE WLRDLENELG LVEATSDGVG QLGSEIDHAK CYFQTWPSPP 360 QNFGV

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGRGRAPCCD KSKVKTGPWS PAEDLRLISF IHKNGYSNWR SLPIQAGLSR CGKSCRLRWI  60
NYLRPDVKRG NFTNEEEETI IKLHQTLGNK WSKIASYLPG RTDNEIKNVW NTHLKKRLAK  120
KDEKNHKNQT NDFSRTSSFS TSSTSSFMSS YGNNEGTEEL VLDEGQEGLA NKSYEPKEDI  180
PTTDHDHELK ESSSSSNSSI SCDASDYSNS SARVDVSMPE PEPEPEPEQE EEEEGSLFNL  240
GGPCEADNAT IAYDQVNNNS DDHQVIEIPL EDSDIDFWDM LDNLADPFQS IDESPQLPQE  300
LVASQSSNYD HHTEIEYCRE WLRDLENELG LVEATSDGVG QLGSEIDHAK CYFQTWPSPP  360
QNFGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	8e-73	MYB family protein