PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028067619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 280aa MW: 31179.6 Da PI: 6.1368 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.4e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++v+++G+g +W + +++ g++R++k+c++rw++yl XP_028067619.1 14 RGPWSPEEDITLKNYVERFGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.8 | 6.1e-14 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T eEd++++ + + G++ W+ Ia++++ gRt++++k++w++ XP_028067619.1 68 RGGFTVEEDDIILTLYNNIGSR-WSVIASHLQ-GRTDNDVKNYWNT 111 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MGRSPCCDKT KVKRGPWSPE EDITLKNYVE RFGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPDIKRGG FTVEEDDIIL TLYNNIGSRW SVIASHLQGR TDNDVKNYWN TKLKKKLLPL 120 PPTENNSNNT STITTNNNAS YFSSSTASSP LVTNLDTNTY HSHGNSIFSN NMISASFQPA 180 MNVNYQQKFL PQGLVSEEPV VQSSLPRFIE VSEIGSSAAD GSTFRGISLS EEVASFSDIE 240 NKYGLWSGNG GGEDEDNDDR WLMDLLGSSF SYDLLNSFGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 4e-66 | MYB family protein |