PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028067452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Dof | ||||||||
Protein Properties | Length: 247aa MW: 27871.1 Da PI: 4.5884 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.8 | 4.1e-37 | 32 | 87 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC stntkfCyynnys sqPryfCk+CrryWt+GG+lrnvPvGgg+rk +++ XP_028067452.1 32 PNCPRCASTNTKFCYYNNYSFSQPRYFCKGCRRYWTRGGSLRNVPVGGGCRKTRRA 87 58**************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MFAANDQMLQ YPSRPLMIER SWKSCNAAEI APNCPRCAST NTKFCYYNNY SFSQPRYFCK 60 GCRRYWTRGG SLRNVPVGGG CRKTRRAKVV RSLQNQRPTT VTSESDPPPP VALSCRSGGG 120 GSDIDLAEVF AKFLNQNNPT REDDRNQQNQ QLMQDVVVNQ QKEQLSQEFG VGSELGSVGL 180 QTMVSDLELN QGLLQWCDDQ TILPGFEWQP MVDLQEFGSF SSDDDQPEIS ANLISDNWSM 240 FDLSEYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21340.1 | 6e-45 | Dof family protein |