PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066850.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 384aa MW: 41978.7 Da PI: 9.389

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80	2.2e-25	126	169	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v+ g+k+CErH++rgr+rsrk++e XP_028066850.1 126 DPEPGRCRRTDGKKWRCSRDVVTGHKYCERHMNRGRNRSRKPVE 169 79***************************************987 PP
2	QLQ	36.4	1.6e-13	55	87	1	33
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 s+F+ Q+q+L+ Q+l++++++a+ vPp+Ll XP_028066850.1 55 SYFSLGQWQELELQALIFRHMLAGSCVPPQLLH 87 789****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MDFNLKQWKY QQHESDLQQH QQPSGSHPEL TSKLTHLSVF PPDSTTASRF PKMGSYFSLG 60 QWQELELQAL IFRHMLAGSC VPPQLLHLLN KTLLSPPPTP TPPSYYSLQH FPHYNPTWYW 120 GRGGMDPEPG RCRRTDGKKW RCSRDVVTGH KYCERHMNRG RNRSRKPVEI PTPSSSTSTA 180 GGGSSGGGGG VIKTNTAFAA QPRTSMGTGG TTHFNLAGPS PSIDLLHLNQ RPSESKPENK 240 LSLFETQNEV SGDGKSGGRV LRCFFDDWPR SLQQPSNAGT NASPVTSSTC LSISTPNNPP 300 PSDFSLKLST GNGDDRPGHQ EVSVERERLQ LNWAASWGTN PVAPMGGPLA EALRSSTASN 360 SSPTSVLHQL QRGTMSETTS YVST

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MDFNLKQWKY QQHESDLQQH QQPSGSHPEL TSKLTHLSVF PPDSTTASRF PKMGSYFSLG  60
QWQELELQAL IFRHMLAGSC VPPQLLHLLN KTLLSPPPTP TPPSYYSLQH FPHYNPTWYW  120
GRGGMDPEPG RCRRTDGKKW RCSRDVVTGH KYCERHMNRG RNRSRKPVEI PTPSSSTSTA  180
GGGSSGGGGG VIKTNTAFAA QPRTSMGTGG TTHFNLAGPS PSIDLLHLNQ RPSESKPENK  240
LSLFETQNEV SGDGKSGGRV LRCFFDDWPR SLQQPSNAGT NASPVTSSTC LSISTPNNPP  300
PSDFSLKLST GNGDDRPGHQ EVSVERERLQ LNWAASWGTN PVAPMGGPLA EALRSSTASN  360
SSPTSVLHQL QRGTMSETTS YVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	6e-69	GRF family protein