PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028066526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36953.5 Da PI: 5.3472 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd+ l+++++ G +W++ ++ g+ R++k+c++rw +yl XP_028066526.1 14 KGRWTAEEDQTLIKYIQSNGEVSWRALPKNAGLLRCGKSCRLRWVNYL 61 79******************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+ +v++++ lG++ W++Ia++++ gRt++++k++w+++l XP_028066526.1 67 RGNITAEEETTIVNLHASLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MGRAPCCEKV GLRKGRWTAE EDQTLIKYIQ SNGEVSWRAL PKNAGLLRCG KSCRLRWVNY 60 LRGNLKRGNI TAEEETTIVN LHASLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYYKI 120 PNDGESVPTS SIPTAKMAAT FTPSQRGRVS RSDAKKYKKK VPSAANVGLA EERERMNLDE 180 QTVERGGQVG GVLLHGSCMD SEVMCLGDQV TNSSEEKEKV VVLGPYKELE NDMVHNNIIM 240 EARVDEEREN RVLGENVNGF EEIKCGFLCS NSEFGEWYSY PSPTMNSCFD SDQWVGCNWD 300 SCDEGLKLGD EEEDSFWLWD SSMIASAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 1e-72 | MYB family protein |