PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066274.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 263aa    MW: 30174 Da    PI: 8.3829
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476.1e-151360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd +l+ +++++G  +W+  ++  g+ R++k+c++rw +yl
   XP_028066274.1 13 KGTWTAEEDRKLKAYITRYGCWNWRQLPKFAGLSRCGKSCRLRWMNYL 60
                     799*****************99************************97 PP
2Myb_DNA-binding59.38.3e-1966111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE++l++++++ lG++ W++Ia+ ++ gRt++++k++w++yl
   XP_028066274.1  66 RGNFSKEEEDLIINLHESLGNR-WSAIAAQLP-GRTDNEIKNHWHTYL 111
                      89********************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MRTPCCDKNG LKKGTWTAEE DRKLKAYITR YGCWNWRQLP KFAGLSRCGK SCRLRWMNYL  60
RPNIKRGNFS KEEEDLIINL HESLGNRWSA IAAQLPGRTD NEIKNHWHTY LKKCTRQQIP  120
ISQAQKPRSN DRSKSKKTGQ KTSKFKISSV SPSTHQIFES SQFSPPPPPP LSSELCSLMI  180
DTATVNSPSS IAENDVSPSE MFAETNASFW TDPIFVDNYD NTYDVLSPLV VDTGFLSPHT  240
PVIDEEFLCS YNFYDEFNNV LNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.13e-59MYB family protein