PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066199.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 493aa MW: 55227.8 Da PI: 7.3387

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	60.9	2.3e-19	299	347	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +i +ed+ ++ +l++++AAk+L+v+ ++LKr CR yGI+RWP Rki+++ XP_028066199.1 299 KIPVEDILQNSELSLENAAKSLKVSKSTLKRVCRTYGIERWPPRKINKI 347 68899*****************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MKLDDDKNEA RKVAFDEIEN VLKSVCDVHD VPLAQAWVPC KMGWPCRALV DGGILHASCF 60 YKKDDYGEDE DDYGEDEDAF HHISSLFHLK NGVGVVGRAL LSTNMVFCRD VTQLSLTEYP 120 LAHYARKARL SGCFAICLES NCAGNDVYVL EFFMPMSNNA SENPHTSLRK ILETMRKKFH 180 CLRVSSREEL GEELHVEEIS IQNGEKLDPV QIPQTTISLP QMELSQSEVE VMQVDSSDQQ 240 LVNAINTGSN VGGTEHHNFA ITCTQEKSTV KVSKRKGNKS RGAVKTSKRD GSNIGVKIKI 300 PVEDILQNSE LSLENAAKSL KVSKSTLKRV CRTYGIERWP PRKINKIGCS QLDESAPCVN 360 SDHLPSTQSS ATIVHTEPHN TTMQDVNIVT IKAKYGEGIT MKFRLSLSSR FVHLQQEVAK 420 RLNLKAGTYY VKYEDEDGEL ILIGCDEDLQ DYICNSRSLG RSSIVVLLEQ KSSKKKKKKK 480 VTNYPQNNLN HAK

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MKLDDDKNEA RKVAFDEIEN VLKSVCDVHD VPLAQAWVPC KMGWPCRALV DGGILHASCF  60
YKKDDYGEDE DDYGEDEDAF HHISSLFHLK NGVGVVGRAL LSTNMVFCRD VTQLSLTEYP  120
LAHYARKARL SGCFAICLES NCAGNDVYVL EFFMPMSNNA SENPHTSLRK ILETMRKKFH  180
CLRVSSREEL GEELHVEEIS IQNGEKLDPV QIPQTTISLP QMELSQSEVE VMQVDSSDQQ  240
LVNAINTGSN VGGTEHHNFA ITCTQEKSTV KVSKRKGNKS RGAVKTSKRD GSNIGVKIKI  300
PVEDILQNSE LSLENAAKSL KVSKSTLKRV CRTYGIERWP PRKINKIGCS QLDESAPCVN  360
SDHLPSTQSS ATIVHTEPHN TTMQDVNIVT IKAKYGEGIT MKFRLSLSSR FVHLQQEVAK  420
RLNLKAGTYY VKYEDEDGEL ILIGCDEDLQ DYICNSRSLG RSSIVVLLEQ KSSKKKKKKK  480
VTNYPQNNLN HAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	474	480	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-47	Nin-like family protein