PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065493.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 285aa MW: 31946.9 Da PI: 10.3302

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.2	6.9e-16	27	118	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +W+++ + +L+ea ++ +l+rg+l++++W++v++++ + ++ +r+ +qCk++++ l+kryk +k++ ++ + + +s++p+f++l+ XP_028065493.1 27 CWSNDATYTLVEAWGDRYLDLNRGNLRQKHWQDVADAVnavhgHVKKARRTDVQCKNRIDTLKKRYKIEKARVSDSnSGGYTSQWPFFSRLD 118 7***********************************9999888999*****************99888774678899*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MEDSDGATPT SPATTQPPSS MPVREDCWSN DATYTLVEAW GDRYLDLNRG NLRQKHWQDV 60 ADAVNAVHGH VKKARRTDVQ CKNRIDTLKK RYKIEKARVS DSNSGGYTSQ WPFFSRLDSL 120 IGSSYKPSPA AATHRKTPPA LPPSPSLVPV GPRSKRPAAI MPPAVVDDSF FRRNFSAIAA 180 AAAAAAEAES EKSRSRSSGG GTRRRDGGRN GTEGYRQLAE AIERLGEIYE RVEESKQRQM 240 IKLEKQRMQF AKDLEIQRMK LFMDSQIQIE KMKRARRTSE ADSYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	8e-70	Trihelix family protein