PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064900.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 353aa    MW: 38722.8 Da    PI: 8.04
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.11.1e-31170226158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk  +ksrkpylheSRh hA+rRpRgsgGrF
  XP_028064900.1 170 EEPVYVNAKQYNGILRRRQSRAKAELEKKR-IKSRKPYLHESRHMHAMRRPRGSGGRF 226
                     69************************9998.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MHQRSESSNQ LKSDAENSRL YTISSQAWCA GTGNNAISQD SLEESTLNLS SLQKPSDSLG  60
TKAIETQANG GHDIGDSTNK EMHTTMLQQS VENCKDEQLH ITSVKPPTMG EYLTPPQLEL  120
VGHSIACTSY PCSDPYYAGI MPAYGPQALV HSNALGVHHA RMALPLEVTE EPVYVNAKQY  180
NGILRRRQSR AKAELEKKRI KSRKPYLHES RHMHAMRRPR GSGGRFLNTK KLDSASLNVT  240
SDKGTDSGSV TSAKCSSSLG SKSTPSNPSG NDGSSTSHKE VKESSVQDMN SAQTFSNCNT  300
NVNSCYPYQQ GFQMSAFYSF QHERIDGEDC SGQQHQYARI VGSQTPHRDV TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.18e-49NF-YA family protein