PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064458.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 592aa MW: 65854 Da PI: 7.718

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	58.6	1.2e-18	308	356	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ei led+ + ++ i+dAAk+L v+ ++LKr+CR++GI+RWP R i+++ XP_028064458.1 308 EIFLEDILQTSQMRIEDAAKSLHVSISTLKRACRKLGISRWPPRHINKI 356 68899*****************************************996 PP
2	RWP-RK	58.5	1.3e-18	437	486	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + i++ed+ + ++ i+dAA++L v+ ++LKr+CR++GI+RWP R i+++ XP_028064458.1 437 NAIHIEDILQTSEMRIQDAANSLHVSISTLKRACRKLGISRWPPRHINKI 486 57999******************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MFKSMGTPVH GSRRILTNQI EDKNEAALRD EILDVLKLVL EVHRLPLAQI WRTCRVCRSL 60 FNNGVFGLSR MSGLSYLMEE NDEIFLRACG HHHLRMGMGV VGTALESLNL VFCADVTQFS 120 ITEYPMTHYA REFGLSGCGC FSVCLRSSNP GNDIYVLEFF LPVSNKVGGN VMTSLMKEIL 180 GTMRKKIQSF KLASGEELGE ELIVEVIDFQ HGEKKIRTLK LSSGEELGEE FSEVTDFHNG 240 EKLNSVQISQ TRPEPLQNGA DLMELESSDQ QSMDAVNNES NVISAERSNS TCSQKLKRKQ 300 NKTGGKIEIF LEDILQTSQM RIEDAAKSLH VSISTLKRAC RKLGISRWPP RHINKINKNG 360 GSSVQISPTT GSLPRLEPLQ KQGDMMQLNS SDQQSMDAIN ITNVVGAEQS NIAVTCSQEK 420 YAIKRSEREH KNTGVRNAIH IEDILQTSEM RIQDAANSLH VSISTLKRAC RKLGISRWPP 480 RHINKINKNG GSSVQISPTT GSLPRLEPLQ KQGDMMQLNS SDQQSMDAIN ITNVVSAEQS 540 NIAVTCSQEK YAIKRSERER IKTGIRIEIP PEGILQASEM SLNDAANSLH VS

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MFKSMGTPVH GSRRILTNQI EDKNEAALRD EILDVLKLVL EVHRLPLAQI WRTCRVCRSL  60
FNNGVFGLSR MSGLSYLMEE NDEIFLRACG HHHLRMGMGV VGTALESLNL VFCADVTQFS  120
ITEYPMTHYA REFGLSGCGC FSVCLRSSNP GNDIYVLEFF LPVSNKVGGN VMTSLMKEIL  180
GTMRKKIQSF KLASGEELGE ELIVEVIDFQ HGEKKIRTLK LSSGEELGEE FSEVTDFHNG  240
EKLNSVQISQ TRPEPLQNGA DLMELESSDQ QSMDAVNNES NVISAERSNS TCSQKLKRKQ  300
NKTGGKIEIF LEDILQTSQM RIEDAAKSLH VSISTLKRAC RKLGISRWPP RHINKINKNG  360
GSSVQISPTT GSLPRLEPLQ KQGDMMQLNS SDQQSMDAIN ITNVVGAEQS NIAVTCSQEK  420
YAIKRSEREH KNTGVRNAIH IEDILQTSEM RIQDAANSLH VSISTLKRAC RKLGISRWPP  480
RHINKINKNG GSSVQISPTT GSLPRLEPLQ KQGDMMQLNS SDQQSMDAIN ITNVVSAEQS  540
NIAVTCSQEK YAIKRSERER IKTGIRIEIP PEGILQASEM SLNDAANSLH VS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-45	Nin-like family protein