PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064444.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 323aa    MW: 37550.9 Da    PI: 6.5428
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.65.3e-2661142186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++qe+++ i++r e+e+++  +k++k+lWe vs++mre g++rs+ qCk+kw+nl ++yk  ++g+ ++     ++cp+f++l+
  XP_028064444.1  61 QWSHQETRDFIAIRAELERDFTVAKRNKTLWEVVSSRMRELGYRRSADQCKCKWKNLVNKYKGKETGDPDN----GRQCPFFEELH 142
                     7*****************************************************************99984....678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MMHGGGGGGG DGGGGGRENE GLGRLTQMMM PLPLQLNQAA ISALAGGDDD EFPRKDERVP  60
QWSHQETRDF IAIRAELERD FTVAKRNKTL WEVVSSRMRE LGYRRSADQC KCKWKNLVNK  120
YKGKETGDPD NGRQCPFFEE LHAVFTEREK DMQRTLLESE SGASHAKKRV KRIGGDPSSE  180
ELSDYEYEDE VESGNPRKKK GEIEKRLRTA GSDKASRQPN MGNTNNSGNN LSSIQEMLQE  240
FLQQQQRIEM LWRESIERHN YERQMFEQEW RQSMEKLERE RLMAEQAWRE REEQRRIREE  300
SRAEKRDAVL TMLLNKLINE NNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.13e-31Trihelix family protein