PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064443.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 323aa MW: 37550.9 Da PI: 6.5428 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 82.6 | 5.3e-26 | 61 | 142 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++qe+++ i++r e+e+++ +k++k+lWe vs++mre g++rs+ qCk+kw+nl ++yk ++g+ ++ ++cp+f++l+ XP_028064443.1 61 QWSHQETRDFIAIRAELERDFTVAKRNKTLWEVVSSRMRELGYRRSADQCKCKWKNLVNKYKGKETGDPDN----GRQCPFFEELH 142 7*****************************************************************99984....678******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MMHGGGGGGG DGGGGGRENE GLGRLTQMMM PLPLQLNQAA ISALAGGDDD EFPRKDERVP 60 QWSHQETRDF IAIRAELERD FTVAKRNKTL WEVVSSRMRE LGYRRSADQC KCKWKNLVNK 120 YKGKETGDPD NGRQCPFFEE LHAVFTEREK DMQRTLLESE SGASHAKKRV KRIGGDPSSE 180 ELSDYEYEDE VESGNPRKKK GEIEKRLRTA GSDKASRQPN MGNTNNSGNN LSSIQEMLQE 240 FLQQQQRIEM LWRESIERHN YERQMFEQEW RQSMEKLERE RLMAEQAWRE REEQRRIREE 300 SRAEKRDAVL TMLLNKLINE NNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 3e-31 | Trihelix family protein |