PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 294aa MW: 33927.2 Da PI: 5.3629 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.3 | 3.6e-12 | 30 | 106 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 W+ qe l+Li+ +e++ r++ + ++W+ + +++ + + r+ +qC+ kw++l +ykkik +e+++ s+++s + XP_028064427.1 30 WSSQESLTLITEIAAVERDCRNTLSSFQKWKIIVENCNSLEVFRTLNQCRRKWDSLLSDYKKIKLWESSE-SRVESYW 106 ********************************************************************96.6666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MSMDEQEDHG GRHSRASASR RTRSQVAPDW SSQESLTLIT EIAAVERDCR NTLSSFQKWK 60 IIVENCNSLE VFRTLNQCRR KWDSLLSDYK KIKLWESSES RVESYWSIDY ERRCEFGFPE 120 DFDFEVFKAI DDHLKVGDGS DTDPDVDPEA VADGVAEPDL KKQRRRVMPQ KRSTEERVKP 180 QKRKINKKIM PVQGRVEKRV KPLKHSIDEK ILLKNNLEEK EQMMAAKLYE NAELITDILK 240 GNLGESSDCL LADLKNVNDS QTDFTRHQGD RLITCLGNLA DTLDQLCDIV QECG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 9e-58 | Trihelix family protein |