PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064339.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 660aa MW: 72275 Da PI: 6.174

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.4	7.9e-29	215	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_028064339.1 215 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 268 79*****************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	217	267	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_028064339.1 217 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 267 678***********************************************7 PP
3	Response_reg	74.8	3.3e-25	36	144	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l++ y ev+ + +e+al ll+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + G XP_028064339.1 36 VLVVDDDSTCLMILEKMLRNCLY-EVTKCNRAEKALSLLRENRngYDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKSVVMKGVTHG 128 89*******************.***********99999*******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l++ XP_028064339.1 129 ACDYLIKPVRIEALRN 144 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MNLGGQGARS MSVPSYSVSW KPGDAVSDQF PVGLRVLVVD DDSTCLMILE KMLRNCLYEV 60 TKCNRAEKAL SLLRENRNGY DIVISDVHMP DMDGFKLLEH VGLEMDLPVI MMSADDSKSV 120 VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKRKNEWKDF EQSGSIDEGE QQQQKLSEDA 180 DFSSSANEGS WRNAKRRKDE EDEVEERDDT SSSKKPRVVW SVELHQQFVA AVNQLGIDKA 240 VPKKILELMN VPGLTRENVA SHLQKYRLYL RRLSGVSHHQ SGLNNSFVGP ADATFGPISS 300 FNGLDFQALA ATGQIPAQSL ASLQAAALGR STAKSGISVP LIDQRNLFSF EMPKRFETPQ 360 PSNNNKQINL LHGIPTTMEP KQLANLHQSV QSFRGMNNMQ TNPHGSQSSS LLVQMSQPHS 420 RPQMLNDTNA NHLLRLPSSI APPALSTGMT SGVLVSIAPP ALSTGMTSGV FSRNGIADNA 480 RGTVYNSVSQ PSSMVDFSID RNTDLPRNGF LLGNNSGMSG ITSKAALQEE GNSGMKGSRG 540 FAPSYDIFSD LHQHKSQDWE LQSLGLNFDT SQHVNMQGNI DVPPSVFVDQ SFSSCQNNAH 600 NRNTSIGKGI FSVGEDSGNG TIEQYSQEDL MSALLKQQEG IGPASNEFGF DGYSLDNLPV

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MNLGGQGARS MSVPSYSVSW KPGDAVSDQF PVGLRVLVVD DDSTCLMILE KMLRNCLYEV  60
TKCNRAEKAL SLLRENRNGY DIVISDVHMP DMDGFKLLEH VGLEMDLPVI MMSADDSKSV  120
VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKRKNEWKDF EQSGSIDEGE QQQQKLSEDA  180
DFSSSANEGS WRNAKRRKDE EDEVEERDDT SSSKKPRVVW SVELHQQFVA AVNQLGIDKA  240
VPKKILELMN VPGLTRENVA SHLQKYRLYL RRLSGVSHHQ SGLNNSFVGP ADATFGPISS  300
FNGLDFQALA ATGQIPAQSL ASLQAAALGR STAKSGISVP LIDQRNLFSF EMPKRFETPQ  360
PSNNNKQINL LHGIPTTMEP KQLANLHQSV QSFRGMNNMQ TNPHGSQSSS LLVQMSQPHS  420
RPQMLNDTNA NHLLRLPSSI APPALSTGMT SGVLVSIAPP ALSTGMTSGV FSRNGIADNA  480
RGTVYNSVSQ PSSMVDFSID RNTDLPRNGF LLGNNSGMSG ITSKAALQEE GNSGMKGSRG  540
FAPSYDIFSD LHQHKSQDWE LQSLGLNFDT SQHVNMQGNI DVPPSVFVDQ SFSSCQNNAH  600
NRNTSIGKGI FSVGEDSGNG TIEQYSQEDL MSALLKQQEG IGPASNEFGF DGYSLDNLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	0.0	ARR-B family protein