PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064336.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARR-B
Protein Properties Length: 683aa    MW: 74883.1 Da    PI: 6.2391
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like79.25e-25215264151
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ
  XP_028064336.1 215 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQ 264
                     79*******************.***************************** PP
2Myb_DNA-binding38.23.2e-12217267148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++q +l
   XP_028064336.1 217 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQLLL 267
                      678*********************************************875 PP
3Response_reg74.73.5e-25361441109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+ + +++l+++l++  y ev+ +  +e+al ll+e++  +D+++ D+ mp+mdG++ll++   e  +lp+i+++a ++++ + + +  G
  XP_028064336.1  36 VLVVDDDSTCLMILEKMLRNCLY-EVTKCNRAEKALSLLRENRngYDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKSVVMKGVTHG 128
                     89*********************.***************99999***********************6644.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +e+l++
  XP_028064336.1 129 ACDYLIKPVRIEALRN 144
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 683 aa     Download sequence    
MNLGGQGARS MSVPSYSVSW KPGDAVSDQF PVGLRVLVVD DDSTCLMILE KMLRNCLYEV  60
TKCNRAEKAL SLLRENRNGY DIVISDVHMP DMDGFKLLEH VGLEMDLPVI MMSADDSKSV  120
VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKRKNEWKDF EQSGSIDEGE QQQQKLSEDA  180
DFSSSANEGS WRNAKRRKDE EDEVEERDDT SSSKKPRVVW SVELHQQFVA AVNQLGIDKA  240
VPKKILELMN VPGLTRENVA SHLQLLLGMF SPQLPLWSTH NCNNLVQKYR LYLRRLSGVS  300
HHQSGLNNSF VGPADATFGP ISSFNGLDFQ ALAATGQIPA QSLASLQAAA LGRSTAKSGI  360
SVPLIDQRNL FSFEMPKRFE TPQPSNNNKQ INLLHGIPTT MEPKQLANLH QSVQSFRGMN  420
NMQTNPHGSQ SSSLLVQMSQ PHSRPQMLND TNANHLLRLP SSIAPPALST GMTSGVLVSI  480
APPALSTGMT SGVFSRNGIA DNARGTVYNS VSQPSSMVDF SIDRNTDLPR NGFLLGNNSG  540
MSGITSKAAL QEEGNSGMKG SRGFAPSYDI FSDLHQHKSQ DWELQSLGLN FDTSQHVNMQ  600
GNIDVPPSVF VDQSFSSCQN NAHNRNTSIG KGIFSVGEDS GNGTIEQYSQ EDLMSALLKQ  660
QEGIGPASNE FGFDGYSLDN LPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.21e-176ARR-B family protein