PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 684aa MW: 75011.2 Da PI: 6.2391 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79.2 | 5e-25 | 215 | 264 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ XP_028064335.1 215 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQ 264 79*******************.***************************** PP | |||||||
2 | Myb_DNA-binding | 38.2 | 3.2e-12 | 217 | 267 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++q +l XP_028064335.1 217 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQLLL 267 678*********************************************875 PP | |||||||
3 | Response_reg | 74.7 | 3.5e-25 | 36 | 144 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l++ y ev+ + +e+al ll+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + G XP_028064335.1 36 VLVVDDDSTCLMILEKMLRNCLY-EVTKCNRAEKALSLLRENRngYDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKSVVMKGVTHG 128 89*********************.***************99999***********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l++ XP_028064335.1 129 ACDYLIKPVRIEALRN 144 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 684 aa Download sequence |
MNLGGQGARS MSVPSYSVSW KPGDAVSDQF PVGLRVLVVD DDSTCLMILE KMLRNCLYEV 60 TKCNRAEKAL SLLRENRNGY DIVISDVHMP DMDGFKLLEH VGLEMDLPVI MMSADDSKSV 120 VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKRKNEWKDF EQSGSIDEGE QQQQKLSEDA 180 DFSSSANEGS WRNAKRRKDE EDEVEERDDT SSSKKPRVVW SVELHQQFVA AVNQLGIDKA 240 VPKKILELMN VPGLTRENVA SHLQLLLGMF SPQLPLWSTH NCNNLVQKYR LYLRRLSGVS 300 HHQSGLNNSF VGPADATFGP ISSFNGLDFQ ALAATGQIPA QSLASLQAAA LGRSTAKSGI 360 SVPLIDQRNL FSFEMPKRFE TPQPSNNNKQ INLLHGIPTT MEPKQLANLH QSVQSFRGMN 420 NMQTNPHGSQ SSSLLVQMSQ PHSRPQMLND TNANHLLRLP SSIAPPALST GMTSGVLVSI 480 APPALSTGMT SGVFSRNGIA DNARGTVYNS VSQPSSMVDF SIDRNTDLPR NGFLLGNNSG 540 MSGITSKAAL QEEGNSGMKG SRGFAPSYDI FSDLHQHKSQ DWELQSLGLN FDTSQHVNMQ 600 GNIDVPPSVF VDQSFSSCQN NAHNRNTSIG KGIFSVGEDS GNGTIEQYSQ EDLMSALLKQ 660 QQEGIGPASN EFGFDGYSLD NLPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 1e-176 | ARR-B family protein |