PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063649.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 1146aa MW: 124105 Da PI: 4.921

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.4	3e-17	19	70	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g Wv+eIr+ gk++r++lg+f t+e+Aa a++aa+ l+g+ XP_028063649.1 19 SIYRGVRKRK-WGNWVSEIRES---GKKTRIWLGSFQTPEMAATAYDAAAFHLRGH 70 57***999.******3...467***********************997 PP
2	AP2	51.9	1.9e-16	394	445	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k g+Wv+eIr+p g+r r++lg+f t+e+Aa a++aa+ ++g+ XP_028063649.1 394 STYRGVRKRK-GGKWVSEIREP---GHRSRIWLGSFETPEMAATAYDAAAFHFRGH 445 56***999.9*****8...556*********************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1146 aa Download sequence
MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY 60 DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP 120 APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG 180 SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ 240 DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN 300 NKADAGGCPA LVARGFSTVQ AAGAADQILI QVPNEKNPHY GRLRVHFFPT NYQSGGSNPQ 360 SEPHITDLQA PLIYGMKESS NSHSSGSGGG GAGSTYRGVR KRKGGKWVSE IREPGHRSRI 420 WLGSFETPEM AATAYDAAAF HFRGHGARLN FPELANRLPH PASLSVEHIR LAAQQAAALG 480 LRKLLCASTQ IPSSPAPLDH KRKHEDLEPE TLMADSNANE NKLDSIKRAE EEVEEKEEEA 540 VEGGGSDESE AKRPRLEEKL NSSVAENGVQ EEKGDELAEE GAEKPSEENN NTEPVDTQQS 600 TEGASETVNN EQVPSTDDHE KEDIQPPSIA NPQLESAREQ PCRRELQEPP SAEVPQQGDF 660 SSVEEQPVSE SQTMSRKMEV PNNKVGVLIG QAGDTIWFLQ INSGAKVQIT RDGEADPYSS 720 TRPVELIGTL ENINKAEKLI KDVIEEADAG GSPAHVARGF STVQAAGAAD QILIQVPNEK 780 VRVIIGKGGE TIRSLQTRSG ARIQLLPQCL PDGDQSKERT VHVSGDKKQN EMAREMIKEV 840 MSQSVRLSRL CGGQQELQPR WPAGTPQWGP RGQHPAQPTE YDYDYPQRGP YCSQNSQYPP 900 QSYSNYQPQQ VASRNKFGPG WVQRPPATMQ GPPPQSGGYD YYGRQGHMVD APSSNPVLGP 960 GPSHTAMGPP PSQGNYNYRQ PHGPEYQQAP YSQSAPPQSY GHGYNETKYE NQAPSHHSYG 1020 EDSQSGGYSQ GTHSGYTHQA PSYGMPPHGP PSQVYGQHRA SQPGDMPYQG PISSTQSPSG 1080 QNVPPQQTSP YASSGPTQQT YQLPYGSASV TDGYNQPPPA AASSQQGGQP VLGYGQAAGG 1140 QPARLK

Sequence ? help Back to Top

Protein Sequence Length: 1146 aa Download sequence

MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY  60
DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP  120
APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG  180
SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ  240
DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN  300
NKADAGGCPA LVARGFSTVQ AAGAADQILI QVPNEKNPHY GRLRVHFFPT NYQSGGSNPQ  360
SEPHITDLQA PLIYGMKESS NSHSSGSGGG GAGSTYRGVR KRKGGKWVSE IREPGHRSRI  420
WLGSFETPEM AATAYDAAAF HFRGHGARLN FPELANRLPH PASLSVEHIR LAAQQAAALG  480
LRKLLCASTQ IPSSPAPLDH KRKHEDLEPE TLMADSNANE NKLDSIKRAE EEVEEKEEEA  540
VEGGGSDESE AKRPRLEEKL NSSVAENGVQ EEKGDELAEE GAEKPSEENN NTEPVDTQQS  600
TEGASETVNN EQVPSTDDHE KEDIQPPSIA NPQLESAREQ PCRRELQEPP SAEVPQQGDF  660
SSVEEQPVSE SQTMSRKMEV PNNKVGVLIG QAGDTIWFLQ INSGAKVQIT RDGEADPYSS  720
TRPVELIGTL ENINKAEKLI KDVIEEADAG GSPAHVARGF STVQAAGAAD QILIQVPNEK  780
VRVIIGKGGE TIRSLQTRSG ARIQLLPQCL PDGDQSKERT VHVSGDKKQN EMAREMIKEV  840
MSQSVRLSRL CGGQQELQPR WPAGTPQWGP RGQHPAQPTE YDYDYPQRGP YCSQNSQYPP  900
QSYSNYQPQQ VASRNKFGPG WVQRPPATMQ GPPPQSGGYD YYGRQGHMVD APSSNPVLGP  960
GPSHTAMGPP PSQGNYNYRQ PHGPEYQQAP YSQSAPPQSY GHGYNETKYE NQAPSHHSYG  1020
EDSQSGGYSQ GTHSGYTHQA PSYGMPPHGP PSQVYGQHRA SQPGDMPYQG PISSTQSPSG  1080
QNVPPQQTSP YASSGPTQQT YQLPYGSASV TDGYNQPPPA AASSQQGGQP VLGYGQAAGG  1140
QPARLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71450.1	5e-34	ERF family protein