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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028063648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 1169aa MW: 126388 Da PI: 4.8367 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.1e-17 | 19 | 70 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g Wv+eIr+ gk++r++lg+f t+e+Aa a++aa+ l+g+ XP_028063648.1 19 SIYRGVRKRK-WGNWVSEIRES---GKKTRIWLGSFQTPEMAATAYDAAAFHLRGH 70 57*****999.**********3...467*************************997 PP | |||||||
2 | AP2 | 51.9 | 1.9e-16 | 456 | 507 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k g+Wv+eIr+p g+r r++lg+f t+e+Aa a++aa+ ++g+ XP_028063648.1 456 STYRGVRKRK-GGKWVSEIREP---GHRSRIWLGSFETPEMAATAYDAAAFHFRGH 507 56*****999.9*********8...556***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1169 aa Download sequence |
MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY 60 DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP 120 APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG 180 SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ 240 DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN 300 NKVGVLIGKA GDTIRFLQIN SGAEIQITRD GEADPYSSTR PVELIGTLEN INKAEKLIKD 360 VIEEADAGGC PALVARGFST VQAAGAADQI LIQVPNEKNP HYGRLRVHFF PTNYQSGGSN 420 PQSEPHITDL QAPLIYGMKE SSNSHSSGSG GGGAGSTYRG VRKRKGGKWV SEIREPGHRS 480 RIWLGSFETP EMAATAYDAA AFHFRGHGAR LNFPELANRL PHPASLSVEH IRLAAQQAAA 540 LGLRKLLCAS TQIPSSPAPL DHKRKHEDLE PETLMADSNA NENKLDSIKR AEEEVEEKEE 600 EAVEGGGSDE SEAKRPRLEE KLNSSVAENG VQEEKGDELA EEGAEKPSEE NNNTEPVDTQ 660 QSTEGASETV NNEQVPSTDD HEKEDIQPPS IANPQLESAR EQPCRRELQE PPSAEVPQQG 720 DFSSVEEQPV SESQTMSRKM EVPNNKVGVL IGQAGDTIWF LQINSGAKVQ ITRDGEADPY 780 SSTRPVELIG TLENINKAEK LIKDVIEEAD AGGSPAHVAR GFSTVQAAGA ADQILIQVPN 840 EKVRVIIGKG GETIRSLQTR SGARIQSVRL SRLCGGQQEL QPRWPAGTPQ WGPRGQHPAQ 900 PTEYDYDYPQ RGPYCSQNSQ YPPQSYSNYQ PQQVASRNKF GPGWVQRPPA TMQGPPPQSG 960 GYDYYGRQGH MVDAPSSNPV LGPGPSHTAM GPPPSQGNYN YRQPHGPEYQ QAPYSQSAPP 1020 QSYGHGYNET KYENQAPSHH SYGEDSQSGG YSQGTHSGYT HQAPSYGMPP HGPPSQVYGQ 1080 HRASQPGDMP YQGPISSTQS PSGQNVPPQQ TSPYASSGPT QQTYQLPYGS ASVTDGYNQP 1140 PPAAASSQQG GQPVLGYGQA AGGQPARLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 5e-34 | ERF family protein |