PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063647.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 1207aa MW: 130728 Da PI: 4.8567

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.3	3.2e-17	19	70	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g Wv+eIr+ gk++r++lg+f t+e+Aa a++aa+ l+g+ XP_028063647.1 19 SIYRGVRKRK-WGNWVSEIRES---GKKTRIWLGSFQTPEMAATAYDAAAFHLRGH 70 57***999.******3...467***********************997 PP
2	AP2	51.8	2e-16	456	507	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k g+Wv+eIr+p g+r r++lg+f t+e+Aa a++aa+ ++g+ XP_028063647.1 456 STYRGVRKRK-GGKWVSEIREP---GHRSRIWLGSFETPEMAATAYDAAAFHFRGH 507 56***999.9*****8...556*********************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1207 aa Download sequence
MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY 60 DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP 120 APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG 180 SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ 240 DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN 300 NKVGVLIGKA GDTIRFLQIN SGAEIQITRD GEADPYSSTR PVELIGTLEN INKAEKLIKD 360 VIEEADAGGC PALVARGFST VQAAGAADQI LIQVPNEKNP HYGRLRVHFF PTNYQSGGSN 420 PQSEPHITDL QAPLIYGMKE SSNSHSSGSG GGGAGSTYRG VRKRKGGKWV SEIREPGHRS 480 RIWLGSFETP EMAATAYDAA AFHFRGHGAR LNFPELANRL PHPASLSVEH IRLAAQQAAA 540 LGLRKLLCAS TQIPSSPAPL DHKRKHEDLE PETLMADSNA NENKLDSIKR AEEEVEEKEE 600 EAVEGGGSDE SEAKRPRLEE KLNSSAENGV QEEKGDELAE EGAEKPSEEN NNTEPVDTQQ 660 STEGASETVN NEQVPSTDDH EKEDIQPPSI ANPQLESARE QPCRRELQEP PSAEVPQQGD 720 FSSVEEQPVS ESQTMSRKME VPNNKVGVLI GQAGDTIWFL QINSGAKVQI TRDGEADPYS 780 STRPVELIGT LENINKAEKL IKDVIEEADA GGSPAHVARG FSTVQAAGAA DQILIQVPNE 840 KVRVIIGKGG ETIRSLQTRS GARIQLLPQC LPDGDQSKER TVHVSGDKKQ NEMAREMIKE 900 VMSQSVRLSR LCGGQQELQP RWPAGTPQWG PRGQHPAQPT EYDYDYPQRG PYCSQNSQYP 960 PQSYSNYQPQ QVASRNKFGP GWVQRPPATM QGPPPQSGGY DYYGRQGHMV DAPSSNPVLG 1020 PGPSHTAMGP PPSQGNYNYR QPHGPEYQQA PYSQSAPPQS YGHGYNETKY ENQAPSHHSY 1080 GEDSQSGGYS QGTHSGYTHQ APSYGMPPHG PPSQVYGQHR ASQPGDMPYQ GPISSTQSPS 1140 GQNVPPQQTS PYASSGPTQQ TYQLPYGSAS VTDGYNQPPP AAASSQQGGQ PVLGYGQAAG 1200 GQPARLK

Sequence ? help Back to Top

Protein Sequence Length: 1207 aa Download sequence

MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY  60
DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP  120
APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG  180
SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ  240
DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN  300
NKVGVLIGKA GDTIRFLQIN SGAEIQITRD GEADPYSSTR PVELIGTLEN INKAEKLIKD  360
VIEEADAGGC PALVARGFST VQAAGAADQI LIQVPNEKNP HYGRLRVHFF PTNYQSGGSN  420
PQSEPHITDL QAPLIYGMKE SSNSHSSGSG GGGAGSTYRG VRKRKGGKWV SEIREPGHRS  480
RIWLGSFETP EMAATAYDAA AFHFRGHGAR LNFPELANRL PHPASLSVEH IRLAAQQAAA  540
LGLRKLLCAS TQIPSSPAPL DHKRKHEDLE PETLMADSNA NENKLDSIKR AEEEVEEKEE  600
EAVEGGGSDE SEAKRPRLEE KLNSSAENGV QEEKGDELAE EGAEKPSEEN NNTEPVDTQQ  660
STEGASETVN NEQVPSTDDH EKEDIQPPSI ANPQLESARE QPCRRELQEP PSAEVPQQGD  720
FSSVEEQPVS ESQTMSRKME VPNNKVGVLI GQAGDTIWFL QINSGAKVQI TRDGEADPYS  780
STRPVELIGT LENINKAEKL IKDVIEEADA GGSPAHVARG FSTVQAAGAA DQILIQVPNE  840
KVRVIIGKGG ETIRSLQTRS GARIQLLPQC LPDGDQSKER TVHVSGDKKQ NEMAREMIKE  900
VMSQSVRLSR LCGGQQELQP RWPAGTPQWG PRGQHPAQPT EYDYDYPQRG PYCSQNSQYP  960
PQSYSNYQPQ QVASRNKFGP GWVQRPPATM QGPPPQSGGY DYYGRQGHMV DAPSSNPVLG  1020
PGPSHTAMGP PPSQGNYNYR QPHGPEYQQA PYSQSAPPQS YGHGYNETKY ENQAPSHHSY  1080
GEDSQSGGYS QGTHSGYTHQ APSYGMPPHG PPSQVYGQHR ASQPGDMPYQ GPISSTQSPS  1140
GQNVPPQQTS PYASSGPTQQ TYQLPYGSAS VTDGYNQPPP AAASSQQGGQ PVLGYGQAAG  1200
GQPARLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71450.1	5e-34	ERF family protein