PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063646.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 1207aa MW: 130728 Da PI: 4.8567

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.3	3.2e-17	19	70	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g Wv+eIr+ gk++r++lg+f t+e+Aa a++aa+ l+g+ XP_028063646.1 19 SIYRGVRKRK-WGNWVSEIRES---GKKTRIWLGSFQTPEMAATAYDAAAFHLRGH 70 57***999.******3...467***********************997 PP
2	AP2	51.8	2e-16	455	506	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k g+Wv+eIr+p g+r r++lg+f t+e+Aa a++aa+ ++g+ XP_028063646.1 455 STYRGVRKRK-GGKWVSEIREP---GHRSRIWLGSFETPEMAATAYDAAAFHFRGH 506 56***999.9*****8...556*********************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1207 aa Download sequence
MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY 60 DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP 120 APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG 180 SAENEVQEEK VDELMEEDAE KPSAENNNTE SADTQQPTEG ASETVNNEQA SFTDDHQKQD 240 IQPNSIAYPQ LESAQEQPSG GELQEPPSAE VPQQGFFSSV EEQPVSETQT MSRKMEVPNN 300 KVGVLIGKAG DTIRFLQINS GAEIQITRDG EADPYSSTRP VELIGTLENI NKAEKLIKDV 360 IEEADAGGCP ALVARGFSTV QAAGAADQIL IQVPNEKNPH YGRLRVHFFP TNYQSGGSNP 420 QSEPHITDLQ APLIYGMKES SNSHSSGSGG GGAGSTYRGV RKRKGGKWVS EIREPGHRSR 480 IWLGSFETPE MAATAYDAAA FHFRGHGARL NFPELANRLP HPASLSVEHI RLAAQQAAAL 540 GLRKLLCAST QIPSSPAPLD HKRKHEDLEP ETLMADSNAN ENKLDSIKRA EEEVEEKEEE 600 AVEGGGSDES EAKRPRLEEK LNSSVAENGV QEEKGDELAE EGAEKPSEEN NNTEPVDTQQ 660 STEGASETVN NEQVPSTDDH EKEDIQPPSI ANPQLESARE QPCRRELQEP PSAEVPQQGD 720 FSSVEEQPVS ESQTMSRKME VPNNKVGVLI GQAGDTIWFL QINSGAKVQI TRDGEADPYS 780 STRPVELIGT LENINKAEKL IKDVIEEADA GGSPAHVARG FSTVQAAGAA DQILIQVPNE 840 KVRVIIGKGG ETIRSLQTRS GARIQLLPQC LPDGDQSKER TVHVSGDKKQ NEMAREMIKE 900 VMSQSVRLSR LCGGQQELQP RWPAGTPQWG PRGQHPAQPT EYDYDYPQRG PYCSQNSQYP 960 PQSYSNYQPQ QVASRNKFGP GWVQRPPATM QGPPPQSGGY DYYGRQGHMV DAPSSNPVLG 1020 PGPSHTAMGP PPSQGNYNYR QPHGPEYQQA PYSQSAPPQS YGHGYNETKY ENQAPSHHSY 1080 GEDSQSGGYS QGTHSGYTHQ APSYGMPPHG PPSQVYGQHR ASQPGDMPYQ GPISSTQSPS 1140 GQNVPPQQTS PYASSGPTQQ TYQLPYGSAS VTDGYNQPPP AAASSQQGGQ PVLGYGQAAG 1200 GQPARLK

Sequence ? help Back to Top

Protein Sequence Length: 1207 aa Download sequence

MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY  60
DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP  120
APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG  180
SAENEVQEEK VDELMEEDAE KPSAENNNTE SADTQQPTEG ASETVNNEQA SFTDDHQKQD  240
IQPNSIAYPQ LESAQEQPSG GELQEPPSAE VPQQGFFSSV EEQPVSETQT MSRKMEVPNN  300
KVGVLIGKAG DTIRFLQINS GAEIQITRDG EADPYSSTRP VELIGTLENI NKAEKLIKDV  360
IEEADAGGCP ALVARGFSTV QAAGAADQIL IQVPNEKNPH YGRLRVHFFP TNYQSGGSNP  420
QSEPHITDLQ APLIYGMKES SNSHSSGSGG GGAGSTYRGV RKRKGGKWVS EIREPGHRSR  480
IWLGSFETPE MAATAYDAAA FHFRGHGARL NFPELANRLP HPASLSVEHI RLAAQQAAAL  540
GLRKLLCAST QIPSSPAPLD HKRKHEDLEP ETLMADSNAN ENKLDSIKRA EEEVEEKEEE  600
AVEGGGSDES EAKRPRLEEK LNSSVAENGV QEEKGDELAE EGAEKPSEEN NNTEPVDTQQ  660
STEGASETVN NEQVPSTDDH EKEDIQPPSI ANPQLESARE QPCRRELQEP PSAEVPQQGD  720
FSSVEEQPVS ESQTMSRKME VPNNKVGVLI GQAGDTIWFL QINSGAKVQI TRDGEADPYS  780
STRPVELIGT LENINKAEKL IKDVIEEADA GGSPAHVARG FSTVQAAGAA DQILIQVPNE  840
KVRVIIGKGG ETIRSLQTRS GARIQLLPQC LPDGDQSKER TVHVSGDKKQ NEMAREMIKE  900
VMSQSVRLSR LCGGQQELQP RWPAGTPQWG PRGQHPAQPT EYDYDYPQRG PYCSQNSQYP  960
PQSYSNYQPQ QVASRNKFGP GWVQRPPATM QGPPPQSGGY DYYGRQGHMV DAPSSNPVLG  1020
PGPSHTAMGP PPSQGNYNYR QPHGPEYQQA PYSQSAPPQS YGHGYNETKY ENQAPSHHSY  1080
GEDSQSGGYS QGTHSGYTHQ APSYGMPPHG PPSQVYGQHR ASQPGDMPYQ GPISSTQSPS  1140
GQNVPPQQTS PYASSGPTQQ TYQLPYGSAS VTDGYNQPPP AAASSQQGGQ PVLGYGQAAG  1200
GQPARLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71450.1	5e-34	ERF family protein