PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063429.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 312aa    MW: 34724.8 Da    PI: 10.078
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.9e-18143189148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT eEd +l+++v+++G + W+ Ia+ m  gR +kqc++rw+++l
   XP_028063429.1 143 KGQWTDEEDRKLLNLVTRHGVRKWAQIAENMV-GRAGKQCRERWHNHL 189
                      799*****************************.*************97 PP
2Myb_DNA-binding605.1e-19195237145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ WT+eE+ +lv+a+k+ G++ W+ Ia++++ gRt++++k++w+
   XP_028063429.1 195 KDTWTEEEESILVEAHKKVGNR-WAEIAKRIP-GRTENSIKNHWN 237
                      679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEGGGGGGGG FGYVNLQNNP SLYRPSPPLT AIERFLSSKN NHFSHQQTQN NVHNPGLLVP  60
ISVYGGFSSS CGAIGGYSSN FLGPSFPKKS FIDGLFHDSE TLKWTYEIDP NMGLSEDAKS  120
KERNCKRVAK RAKGGTSTTT LIKGQWTDEE DRKLLNLVTR HGVRKWAQIA ENMVGRAGKQ  180
CRERWHNHLR PDIKKDTWTE EEESILVEAH KKVGNRWAEI AKRIPGRTEN SIKNHWNATK  240
RKQNSKRNNI KKPQGSQNLK CQSQPSILQD YIKSMNPSNR AATTTGSTVT EDFSTHFAPL  300
GDLSDSSIDD SP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.14e-67MYB family protein