PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028063335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | CO-like | ||||||||
Protein Properties | Length: 486aa MW: 53167 Da PI: 6.0257 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.6 | 7.8e-06 | 12 | 43 | 4 | 35 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++++ + l+C+ ++ lC C ++ H+ XP_028063335.1 12 VPCDYCNDQIAVLYCRADSAKLCLFCDQHVHS 43 57***************************995 PP | |||||||
2 | zf-B_box | 22.9 | 1.8e-07 | 54 | 98 | 3 | 41 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+++++++++ C +++ llC+dC H + H++ p XP_028063335.1 54 SQICDNCGSEPVSVRCATDNLLLCHDCDWDAHGScsvsasHDRNP 98 579*************************99994478888887766 PP | |||||||
3 | CCT | 63.8 | 5.1e-22 | 438 | 482 | 1 | 45 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 R +a++RYkeK+k+R+++K+irYesRKa+A++R+RvKGrFvk++e XP_028063335.1 438 RGNAMQRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKASE 482 7789**************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 486 aa Download sequence |
MVSPKSRTGE SVPCDYCNDQ IAVLYCRADS AKLCLFCDQH VHSANALSRK HLRSQICDNC 60 GSEPVSVRCA TDNLLLCHDC DWDAHGSCSV SASHDRNPVE GFSGSPSALE LASALGIDLE 120 DKKPQSQLPS IPNWSFQDSS GVNFDSWMYK SAAGVTLQDL MVPSGNNAMM YSEMGSKRQS 180 PSCGKQNQVL LRQLMELFKT EVVAVDDDNG GSGGGENLVP NQSDWQQANV EGADLGSGGD 240 DEVVDPVNQS LQQQQQQHET PFTSLLMMQT HVDPKSGDQI AQGNVFWDTN HNSQGTQIWD 300 FSLGRLRGHD ESSPLEMGYG TSDAGFMMKS YDELLKEASL ASTKGFGEIY GANCSMTHED 360 LTVFHKNANK PTASHGPATS ESNNLPIGRP SSGLAFIKPK GYSASKDIQF TESSVLLRGE 420 TPTAAITKAD MEQLAQNRGN AMQRYKEKKK NRRYDKHIRY ESRKARADTR KRVKGRFVKA 480 SEAPDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33500.2 | 1e-108 | CO-like family protein |