PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063123.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 371aa MW: 41623.5 Da PI: 6.1523

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	299	333	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_028063123.1 299 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 333 569*****************************885 PP
2	ELK	37.7	4.3e-13	253	274	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlr YsgyLgsLkqEF+ XP_028063123.1 253 ELKGQLLRRYSGYLGSLKQEFM 274 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MEGGGGSSST SCLMAFGDNS NGLCPMMMMM PQVTTSPSHH PNVVVVDDNN NNTLFLPLPL 60 TNNNHHDLNR HGSTTGSSYM MLQDHNNNNH NLTTNTACYF MENHSNDHND GGGSCSSSVK 120 DKIMAHPHYH RLLAAYVNCQ KIGAPPEVVA RLEEACASSS AVGHTGTGCI GEDPALDQFM 180 EAYCEMLSKY EQELSKPFQE AMLFLSRIEC QFKALTISSS DSACGDSLDR NGSSEEEADG 240 NNNFIDPQAE DRELKGQLLR RYSGYLGSLK QEFMKKRKKG KLPKEARQQL LDWWSRHYKW 300 PYPSESQKLA LAESTGLDQK QINNWFINQR KRHWKPSEDM QFVVMDATHP HYYMDNVLGN 360 PFPMDISPTL L

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MEGGGGSSST SCLMAFGDNS NGLCPMMMMM PQVTTSPSHH PNVVVVDDNN NNTLFLPLPL  60
TNNNHHDLNR HGSTTGSSYM MLQDHNNNNH NLTTNTACYF MENHSNDHND GGGSCSSSVK  120
DKIMAHPHYH RLLAAYVNCQ KIGAPPEVVA RLEEACASSS AVGHTGTGCI GEDPALDQFM  180
EAYCEMLSKY EQELSKPFQE AMLFLSRIEC QFKALTISSS DSACGDSLDR NGSSEEEADG  240
NNNFIDPQAE DRELKGQLLR RYSGYLGSLK QEFMKKRKKG KLPKEARQQL LDWWSRHYKW  300
PYPSESQKLA LAESTGLDQK QINNWFINQR KRHWKPSEDM QFVVMDATHP HYYMDNVLGN  360
PFPMDISPTL L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	269	278	LKQEFMKKRK
2	275	279	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-142	TALE family protein