PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063092.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 336aa MW: 37332.3 Da PI: 6.928

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.6	9.1e-34	23	172	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................... 65 +g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l + XP_028063092.1 23 TGRKDRHSKVVTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKNAIDKLSEIppwnpidsttvmpppppppppnvdpnaeime 117 79************************************************************999999999999888887776665555543333 PP TCP 66 .............ssssaseceaesssssasnsssg.................................k 89 s +++s++ XP_028063092.1 118 ssscgygfhhlpqS---------------MDTQSIAiaddadtmksffpvsssetssmnfqgyphedlcL 172 33333333222220...............22223334344333334444433222222333333443441 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MIMKNSGGGE IVQVQGGHIL RSTGRKDRHS KVVTSKGPRD RRVRLSAHTA IQFYDVQDRL 60 GYDRPSKAVD WLMKKAKNAI DKLSEIPPWN PIDSTTVMPP PPPPPPPNVD PNAEIMESSS 120 CGYGFHHLPQ SMDTQSIAIA DDADTMKSFF PVSSSETSSM NFQGYPHEDL CLSLHSLQDP 180 SSSHHHTTAD STDHHHHHHQ TLFPVGFEAN YPRLVSWNGG GNGENREGYM FSSSQAMSMP 240 FQPPQPFFCQ SSVLSSQRGP LQSSFLPTVH APWNEDHPIH SNLHHNTRQP IQQSSISTTQ 300 FASSHEALLQ FHNEEEHHGL VLSNKPSSSA SPNSHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-49	TCP family protein