PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028062502.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 284aa    MW: 31303.5 Da    PI: 8.7967
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028062502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix575e-182097271
        trihelix  2 WtkqevlaLiearr........emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
                    Wt qe+++Liea++        ++ee+ +r+k ++ +W++v +++++ g+ rs++qC++kw+nl +++kk+++ e++ 
  XP_028062502.1 20 WTVQETMVLIEAKKmdderrmkRVEESEGRSKPAELRWKWVEDYCWRNGCLRSQNQCNDKWDNLMRDFKKVRDYERRL 97
                    *************954444444444444456899***************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MMANQSGGNS LLRDYRKGNW TVQETMVLIE AKKMDDERRM KRVEESEGRS KPAELRWKWV  60
EDYCWRNGCL RSQNQCNDKW DNLMRDFKKV RDYERRLAEK GGGGGDTSGG GGGGGGGSYW  120
KIEKHERKER NLPSNMLPQI YEALVEVVER RGGVRVVVGV GSSGGVGGSN VGHSGYVVER  180
STSNAVVQPP LLLPPLQHSI SAPPQTVLSL PPPPPPPPPV AATQPHSLPQ SQPLPTVAQI  240
LIQVSILTHQ QREGEEEREQ VALLQVEAHQ TLNLGMQSPK VLPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-58Trihelix family protein