PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062255.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 528aa MW: 59509.3 Da PI: 8.2963

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.8	6.5e-16	345	392	5	48
RWP-RK 5 isledlskyFslpikdAAkeLg....vclTvLKriCRqyGIkRWPhRk 48 isledl+++ ++++dAA++Lg v+ ++ Kr CR+yGI RWP Rk XP_028062255.1 345 ISLEDLQRHSGMKVEDAANSLGsnfvVSRSTFKRVCRKYGIGRWPPRK 392 89*********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MISMEYKFYV DGESEEELGL PGRVFQYKFL ESTPDVRYYS TKEHPQGSHA VHCNVTQSLA 60 LPVFDHSSQS CVGVLELVTN KVELEYSDPY FHGDILANSK NDDFQYVLNK IRNVLKVVRQ 120 VHHLRLAQTW VPCWFCSNGI HGGTFDVSSE GRVLCTLKTV SYLAGEGEWP YGEDYTFLDA 180 CQSHHLRKGQ GVVGRVLSSH KLLFCPDITR FSIADYPLAH YARKFGLTGC FAICLQGPFT 240 KNCFKLATGE KLRQDLSIEV IDFCNDEKLD SMQTPQTNRY STTLPSQNIR EMTQLDSSNL 300 ESMDAINNGR NVVSAEQSNI HGTDVQKKSK TKTSEREHRK AGILISLEDL QRHSGMKVED 360 AANSLGSNFV VSRSTFKRVC RKYGIGRWPP RKGLRNNHSP SDKTVRGVDQ EKISKCSQRD 420 CPSSNQAVPT VGRTKQHIKA TQDACNVTVK AKYLQKAIKF QLSSSSGIKE LQQQVAKRLN 480 LKAGTYIIRY KDDENDSVLI CCDDDLHDYM RSSSSLGSTL ITIWLQPI

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MISMEYKFYV DGESEEELGL PGRVFQYKFL ESTPDVRYYS TKEHPQGSHA VHCNVTQSLA  60
LPVFDHSSQS CVGVLELVTN KVELEYSDPY FHGDILANSK NDDFQYVLNK IRNVLKVVRQ  120
VHHLRLAQTW VPCWFCSNGI HGGTFDVSSE GRVLCTLKTV SYLAGEGEWP YGEDYTFLDA  180
CQSHHLRKGQ GVVGRVLSSH KLLFCPDITR FSIADYPLAH YARKFGLTGC FAICLQGPFT  240
KNCFKLATGE KLRQDLSIEV IDFCNDEKLD SMQTPQTNRY STTLPSQNIR EMTQLDSSNL  300
ESMDAINNGR NVVSAEQSNI HGTDVQKKSK TKTSEREHRK AGILISLEDL QRHSGMKVED  360
AANSLGSNFV VSRSTFKRVC RKYGIGRWPP RKGLRNNHSP SDKTVRGVDQ EKISKCSQRD  420
CPSSNQAVPT VGRTKQHIKA TQDACNVTVK AKYLQKAIKF QLSSSSGIKE LQQQVAKRLN  480
LKAGTYIIRY KDDENDSVLI CCDDDLHDYM RSSSSLGSTL ITIWLQPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-69	Nin-like family protein